DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and KCNK5

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_003731.1 Gene:KCNK5 / 8645 HGNCID:6280 Length:499 Species:Homo sapiens


Alignment Length:344 Identity:62/344 - (18%)
Similarity:113/344 - (32%) Gaps:133/344 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 ELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAP------- 400
            ::|..|.|:|.|:::...:..:...:.    ..:|.|. ||:::.:|::|:|:||...       
Human   159 QITCTVIFIVWGVLVHLVIPPFVFMVT----EGWNYIE-GLYYSFITISTIGFGDFVAGVNPSAN 218

  Fly   401 -----KTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRQP 460
                 :.::.:::     ..|:..::|.|...||.|...:       |..|||||.........|
Human   219 YHALYRYFVELWI-----YLGLAWLSLFVNWKVSMFVEVH-------KAIKKRRRRRKESFESSP 271

  Fly   461 ------RLPGAPGG-----------------------------VSGCGTPGSGPHSGPMGSGGTG 490
                  ::.|:...                             .||.|..|.||..||.|.|   
Human   272 HSRKALQVKGSTASKDVNIFSFLSKKEETYNDLIKQIGKKAMKTSGGGETGPGPGLGPQGGG--- 333

  Fly   491 PRRMNNKTKDLVSPKSVAQLFAGPLGASIVAMSPRTMLDLNPALAMGKPTFQPRIPT--PLAATP 553
                                        :.|:.|    .|.|.:...|    .|:||  .::.| 
Human   334 ----------------------------LPALPP----SLVPLVVYSK----NRVPTLEEVSQT- 361

  Fly   554 PPPVSSAGGMTASGIGTTSATGATSAPQPATPLPSIAVSTTASVG----------------KDLG 602
               :.|.|.::.|    ........||:.::|.|.:.::....:.                :|..
Human   362 ---LRSKGHVSRS----PDEEAVARAPEDSSPAPEVFMNQLDRISEECEPWDAQDYHPLIFQDAS 419

  Fly   603 ISTTTTTA----QETSKKA 617
            |:...|.|    :||||.:
Human   420 ITFVNTEAGLSDEETSKSS 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585
BTB_2 27..117 CDD:280393
Ion_trans 244..439 CDD:278921 20/107 (19%)
Ion_trans_2 355..429 CDD:285168 12/85 (14%)
KCNK5NP_003731.1 Ion_trans_2 <81..137 CDD:311712
Ion_trans_2 171..243 CDD:311712 11/81 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..335 10/53 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..388 7/35 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 428..499 4/11 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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