DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and KCO2

DIOPT Version :10

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_199449.1 Gene:KCO2 / 834680 AraportID:AT5G46370 Length:443 Species:Arabidopsis thaliana


Alignment Length:356 Identity:67/356 - (18%)
Similarity:123/356 - (34%) Gaps:121/356 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LNHSKW-----GTHRYITVHN------IKLHYVEQGSSSKPLMLFLHGLPDFWYSWRYQ-MHEFS 102
            ||...|     |..:|...::      |.::..:||:.:..:.:.:.|..|..:....: :.:.:
plant   323 LNRDGWKDIVVGAPQYFDKNDREIGGAIYVYINQQGNWNDVMPVRIVGTKDSMFGISVKNIGDIN 387

  Fly   103 KD-YWTVALDLP---GFGR------------SEPPAHSVTYKLSNLARLVCSLITALGKSECVLV 151
            :| |..:|:..|   |||:            |||..                          |:.
plant   388 QDGYPDIAVGAPYDDGFGKVYVYHGSKDGIISEPAQ--------------------------VIE 426

  Fly   152 GNGAGS-IIGWHIV-------NQYPDRVSRYVMLGMSSEAILQQLYQRGAIPLATLLKSAFLLYA 208
            |....: ..|:.|.       |.|||     :.:|..|:::  ::::  :.|:.|:.|:      
plant   427 GRSTNTRFFGYSIAGDMDLDQNSYPD-----IAVGSLSDSV--KVFR--SRPVITIKKT------ 476

  Fly   209 GELPVLLARTDDYAMFNK--LLGPDAKPQDLE-AYKYTFAQPAALGHALTAFRENFADFFLEEYE 270
                  :..|.|...|||  ...|.....::| .::|| |.|......||.    ...|.||...
plant   477 ------IKVTPDRIDFNKKNCDAPSGICLEVEGCFEYT-ANPKTYNPVLTL----SCTFELENDR 530

  Fly   271 YRVRKPANIPGLFLFQEE------DCFGQ-------TPEEYMGLLTDAYEPL------ETRFVAR 316
            ..::||..:....|.||.      :..||       |..:.:..:.|...|:      |.:.|.|
plant   531 RLLQKPLRMNFKDLPQESKLPKTIELRGQNQRRCVTTTLQLLESIRDKLHPIAVSVSAEIKSVRR 595

  Fly   317 VGR----------FMHQDDPKTVNKLIGEFL 337
            ..|          .::.::||.....: :||
plant   596 RKRQSSPLPELMPILNSNEPKNATANV-QFL 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB_Shaw-like 24..135 CDD:349723 20/112 (18%)
Ion_trans 188..439 CDD:459842 37/182 (20%)
PRK14959 <418..>585 CDD:184923
KCO2NP_199449.1 Ion_trans_2 152..233 CDD:462301
Ion_trans_2 280..350 CDD:462301 5/26 (19%)
FRQ1 <374..>426 CDD:444056 11/77 (14%)
Blue background indicates that the domain is not in the aligned region.

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