DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shaw and KCTD17

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_011528676.1 Gene:KCTD17 / 79734 HGNCID:25705 Length:370 Species:Homo sapiens


Alignment Length:85 Identity:31/85 - (36%)
Similarity:40/85 - (47%) Gaps:2/85 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VVLNVGGIRHETYKATLKKIPATRLSRLT--EALANYDPILNEYFFDRHPGVFAQVLNYYRTGKL 89
            |.|||||....|.:.||.:...:.||||.  |.|.:.......|..||.|..|..:||:.|.|||
Human    33 VRLNVGGTVFLTTRQTLCREQKSFLSRLCQGEELQSDRDETGAYLIDRDPTYFGPILNFLRHGKL 97

  Fly    90 HYPTDVCGPLFEEELEFWGL 109
            ....|:......||.||:.:
Human    98 VLDKDMAEEGVLEEAEFYNI 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 31/85 (36%)
BTB_2 27..117 CDD:280393 31/85 (36%)
Ion_trans 244..439 CDD:278921
Ion_trans_2 355..429 CDD:285168
KCTD17XP_011528676.1 BTB 32..131 CDD:197585 31/85 (36%)
BTB_2 33..121 CDD:280393 31/85 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.