DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and si:ch73-334d15.4

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_001336524.4 Gene:si:ch73-334d15.4 / 796217 ZFINID:ZDB-GENE-091204-184 Length:430 Species:Danio rerio


Alignment Length:441 Identity:169/441 - (38%)
Similarity:248/441 - (56%) Gaps:49/441 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRTG 87
            |..::||||||::|||.:.||..:|.:||:.    |.|.:...:|.||||||.|||.||.|||:|
Zfish    15 SSEKIVLNVGGVKHETLRTTLMSLPGSRLAE----LVNTEKSPSELFFDRHPEVFAHVLQYYRSG 75

  Fly    88 KLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPS----EE 148
            |||.|:::||.|.|||..|||:.|..||||||.|:.|:::|.:.||.:        |||    ||
Zfish    76 KLHCPSNLCGLLLEEEFTFWGISSADVEPCCWETFQQNKETLKALAGI--------KPSVMKKEE 132

  Fly   149 ELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPD 213
            |..:|      ....:...||.   :||:|||:||||..|:.|.::|:|||.:||::|.|.|.| 
Zfish   133 ESGQK------QQSSSSRGWQR---KIWALFDKPYSSVCARIIAIISLFFILLSIIAFSLWTLP- 187

  Fly   214 MRVPIVRNITVKTANGSNGWFLDKTQTNAHI------AFFYIECVCNAWFTFEILVRFISSPNKW 272
                     ::.:....|.|..:.|...:..      |...:|.||:.||.||..:|..|.|:|.
Zfish   188 ---------SINSHQFLNAWASNSTDDFSRTRPPEAQALDAVEIVCSIWFVFEFAIRAGSCPSKL 243

  Fly   273 EFIKSSVNIIDYIATLSFYIDLVLQRFASHLENADILEF---FSIIRIMRLFKLTRHSSGLKILI 334
            .|..:.:||:|.:|...::.     |::|:..:...|.|   ...||::|:|||.:|..|:::|.
Zfish   244 WFFINVMNIVDLLALFPWFF-----RWSSNNFSVFALGFLHAMRCIRLLRVFKLMQHVFGVRVLT 303

  Fly   335 QTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMA 399
            .|.|||...|.::...|.:..:||.::.|:||....:.:...:|...|.||||||:||||||||.
Zfish   304 HTLRASLTSLCIVPLLLSICTLIFGTMFYFAELTHKDSYISSSSGLDGFWWALVTLTTVGYGDML 368

  Fly   400 PKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRR 450
            |.|..|..|..|||:.|||.|.||||:||:||..:.|..:.:..:|:...:
Zfish   369 PVTRQGKCVAFLCAMVGVLLIVLPVPIIVNNFLKFSSLVKTKHSMPRMNEK 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 53/97 (55%)
BTB_2 27..117 CDD:280393 48/89 (54%)
Ion_trans 244..439 CDD:278921 77/203 (38%)
Ion_trans_2 355..429 CDD:285168 37/73 (51%)
si:ch73-334d15.4XP_001336524.4 BTB 19..107 CDD:197585 50/91 (55%)
BTB_2 19..105 CDD:280393 48/89 (54%)
Ion_trans 217..400 CDD:278921 73/187 (39%)
Ion_trans_2 319..402 CDD:285168 41/82 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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