DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and Kcnk10

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001303594.1 Gene:Kcnk10 / 72258 MGIID:1919508 Length:538 Species:Mus musculus


Alignment Length:296 Identity:55/296 - (18%)
Similarity:101/296 - (34%) Gaps:117/296 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 IWSLFDEPYSSNAAKTIGVVSVFF----ICIS------ILSFCLKTHPDMRVPIVRNITVKTANG 229
            ::...::|:.|:...||.:....|    ||:|      ::...|.. .:..|..|.|    ::|.
Mouse    89 VFRALEQPFESSQKNTIALEKAEFLRDHICVSPQELETLIQHALDA-DNAGVSPVGN----SSNS 148

  Fly   230 SNGWFLDKTQTNAHIAFFY---------------------IECVCNAWFTFEILVRFISSPNKWE 273
            |:.|.|..       |||:                     |.|:..|.|...:          :.
Mouse   149 SSHWDLGS-------AFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIPL----------FG 196

  Fly   274 FIKSSVNIIDYIATLSFYIDLVLQRFASHLENADILEFFSIIRIMRLFKLTRHSSGLKILIQTFR 338
            |:.:.:.  |.:.|:          |..           ||.|:.::|:..:.|.....:|.|  
Mouse   197 FLLAGIG--DQLGTI----------FGK-----------SIARVEKVFRKKQVSQTKIRVIST-- 236

  Fly   339 ASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIP-----LGLWWALVTMTTVGYGDM 398
                     :.|::.|.::|.::          |...|..|.     ..:::.:||:||||:||.
Mouse   237 ---------ILFILAGCIVFVTI----------PAVIFKYIEGWTALESIYFVVVTLTTVGFGDF 282

  Fly   399 A--------------PKTYIGMFVGALCALAGVLTI 420
            .              |..:..:.|| |...|.||::
Mouse   283 VAGGNAGINYREWYKPLVWFWILVG-LAYFAAVLSM 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585
BTB_2 27..117 CDD:280393
Ion_trans 244..439 CDD:278921 39/217 (18%)
Ion_trans_2 355..429 CDD:285168 19/85 (22%)
Kcnk10NP_001303594.1 Ion_trans_2 <152..206 CDD:369572 11/72 (15%)
Ion_trans_2 244..323 CDD:369572 19/85 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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