DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Shaw and TNFAIP1

DIOPT Version :9

Sequence 1:	NP_001137782.1	Gene:	Shaw / 33599	FlyBaseID:	FBgn0003386	Length:	619	Species:	Drosophila melanogaster
Sequence 2:	XP_016880482.1	Gene:	TNFAIP1 / 7126	HGNCID:	11894	Length:	391	Species:	Homo sapiens

Alignment Length:	151	Identity:	39/151 - (25%)
Similarity:	54/151 - (35%)	Gaps:	35/151 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   456 QPRQPRLPG-APGGVSG-----CGTPGSGPHSGPMGSGGTG---PRRMNNKTKDLVSPKSVAQLF 511
            :.:|.::.| ||..|..     ||..|....|......|.|   ..|.|::..:.:...|.:...
Human   233 EKKQTKVWGIAPAWVGEDTHPLCGGRGRAVTSTEQKGHGLGSFFQTRWNSQRPESMRRHSTSYSM 297

  Fly   512 AGPLGASIVAMSPRTMLDLNPALAMGKPTFQPRIPTPLAATPPPPVSSAGGM---TASGIGTTSA 573
            ..|       .||.|            |.::|:   .:||...|||.....:   |.|...|:||
Human   298 RLP-------ASPTT------------PCWRPQ---AVAAARLPPVKMRRPLNCGTVSAASTSSA 340

  Fly   574 TGATSAPQPATPLPSIAVSTT 594
            |..|.....||.|| ||...|
Human   341 TALTMTGSSATSLP-IATDQT 360

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID
Shaw	NP_001137782.1	BTB	27..125	CDD:197585
		BTB_2	27..117	CDD:280393
		Ion_trans	244..439	CDD:278921
		Ion_trans_2	355..429	CDD:285168
TNFAIP1	XP_016880482.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910