Sequence 1: | NP_001137782.1 | Gene: | Shaw / 33599 | FlyBaseID: | FBgn0003386 | Length: | 619 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038959057.1 | Gene: | Kcnc4 / 684516 | RGDID: | 1589169 | Length: | 663 | Species: | Rattus norvegicus |
Alignment Length: | 483 | Identity: | 231/483 - (47%) |
---|---|---|---|
Similarity: | 306/483 - (63%) | Gaps: | 54/483 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 DSENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILN----------------EYFF 70
Fly 71 DRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVL 135
Fly 136 DRLD--------LDTEKPSEEELA-RKFGFEE-----DYYKGTISWWQEMKPRIWSLFDEPYSSN 186
Fly 187 AAKTIGVVSVFFICISILSFCLKTHPDMRVPIVRNITV--KTANGSNGWFLDKTQTNAHIAFFYI 249
Fly 250 ECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASHLENADILEFFSI 314
Fly 315 ---IRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERI-------Q 369
Fly 370 PNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMY 434
Fly 435 YSHTQARAKLPKKRRRVLPVEQPRQPRL 462 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Shaw | NP_001137782.1 | BTB | 27..125 | CDD:197585 | 64/113 (57%) |
BTB_2 | 27..117 | CDD:280393 | 57/105 (54%) | ||
Ion_trans | 244..439 | CDD:278921 | 111/204 (54%) | ||
Ion_trans_2 | 355..429 | CDD:285168 | 53/80 (66%) | ||
Kcnc4 | XP_038959057.1 | Potassium_chann | 1..29 | CDD:402836 | |
BTB_KCNC2_4 | 35..159 | CDD:349722 | 69/123 (56%) | ||
Ion_trans | 226..484 | CDD:395416 | 129/262 (49%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 255 | 1.000 | Domainoid score | I1967 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 460 | 1.000 | Inparanoid score | I1505 |
OMA | 1 | 1.010 | - | - | QHG48788 | |
OrthoDB | 1 | 1.010 | - | - | D331021at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm45048 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102927 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11537 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X19 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.980 |