DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shaw and Kcng4

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_080010.2 Gene:Kcng4 / 66733 MGIID:1913983 Length:506 Species:Mus musculus


Alignment Length:471 Identity:142/471 - (30%)
Similarity:227/471 - (48%) Gaps:60/471 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PKKMQH-YAHAAMNLINMDSE-----NRVVLNVGGIRHETYKATLKKIPATRLSRL--------- 54
            ||.::. |...|..:.|.|:.     ..:::||||.|:....:||...|.:|||||         
Mouse    32 PKSVKGLYYSRARKVGNQDASPEANLKEILVNVGGQRYLLPWSTLDAFPLSRLSRLRLCRSHEEI 96

  Fly    55 TEALANYDPILNEYFFDRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCW 119
            |:...:||....|:||||:|..|..::::...|||....::|...|.|||.:||::...:|.|| 
Mouse    97 TQLCDDYDEDSQEFFFDRNPSAFGVIVSFLAAGKLVLLREMCALSFREELSYWGIEETNLERCC- 160

  Fly   120 MTYTQHRDTQETLAVLDRLDLDTEKPSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYS 184
                       ...:|.:|:...|...||...|:...:..:.:...|.|.....::..:.::|.|
Mouse   161 -----------LRKLLKKLEEAAELRREEAAQRQQQRQACHSEVQASRWARSMNQLREMVEDPQS 214

  Fly   185 SNAAKTIGVVSVFFICISILSFCLKTHPDMRVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYI 249
            ....|....:||.|:..:.:|.|:.|.||.|           |....|   :.|:...:|  |.:
Mouse   215 GLPGKVFACLSVLFVATTAVSLCVSTMPDFR-----------AEEGKG---ECTRKCYYI--FVV 263

  Fly   250 ECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQ----------RFASHLE 304
            |.:|.|||:.|..:||:.:|||.:|.:..:|:||.:|...:|:.|.:.          ..:|:||
Mouse   264 ESICVAWFSLEFCLRFVQAPNKCQFFRGPLNVIDILAISPYYVSLAVSDESPEAGERPSSSSYLE 328

  Fly   305 NAD-ILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERI 368
            ... :|.....:||:.:.:|.|||.||:.|..|.|..|:|..||:.||.:.:.:|:.|||.||. 
Mouse   329 KVGLVLRVLRALRILYVMRLARHSLGLQTLGLTVRRCAREFGLLMLFLAVAVTLFSPLVYVAEN- 392

  Fly   369 QPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAM 433
            :.....:|.|||...|||:::|||||||||.|::..|..|.....|:|:|.:|.|...|...|:.
Mouse   393 ESGRVLEFTSIPASYWWAIISMTTVGYGDMVPRSVPGQMVALSSILSGILIMAFPATSIFHTFSH 457

  Fly   434 YY-----SHTQARAKL 444
            .|     ...|.:|:|
Mouse   458 SYLELKREQEQVQARL 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 36/106 (34%)
BTB_2 27..117 CDD:280393 34/98 (35%)
Ion_trans 244..439 CDD:278921 74/210 (35%)
Ion_trans_2 355..429 CDD:285168 31/73 (42%)
Kcng4NP_080010.2 BTB_POZ 58..167 CDD:365784 37/120 (31%)
Ion_trans 219..463 CDD:366146 87/260 (33%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 416..421 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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