DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shaw and KCNA10

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_005540.1 Gene:KCNA10 / 3744 HGNCID:6219 Length:511 Species:Homo sapiens


Alignment Length:472 Identity:177/472 - (37%)
Similarity:261/472 - (55%) Gaps:61/472 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DSENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRT 86
            :...||::|:.|:|.||...||.:.|.|.|....:.:..:|.:.|||||||:...|..:|.||::
Human    83 EGNQRVIINIAGLRFETQLRTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQS 147

  Fly    87 -GKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEEL 150
             ||:..|.:|...:|.:|:.|:.|.|..::        |.|:.:..:.     |.:|..|: .::
Human   148 GGKIRRPANVPIDIFADEISFYELGSEAMD--------QFREDEGFIK-----DPETLLPT-NDI 198

  Fly   151 ARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDMR 215
            .|:|                     |.||:.|.||:||:.:.||||..:.|||..|||:|.|:.|
Human   199 HRQF---------------------WLLFEYPESSSAARAVAVVSVLVVVISITIFCLETLPEFR 242

  Fly   216 ----VPIVR--NITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEF 274
                :.:||  |:.:.....|...|.|        .||.:|..|..|||||:::||:..|:|.:|
Human   243 EDRELKVVRDPNLNMSKTVLSQTMFTD--------PFFMVESTCIVWFTFELVLRFVVCPSKTDF 299

  Fly   275 IKSSVNIIDYIATLSFY----IDLVLQRFASHLENAD--ILEFFSIIRIMRLFKLTRHSSGLKIL 333
            .::.:||||.|:.:.::    .:||.:...|..:|..  ||....::|:.|:|||:|||.||:||
Human   300 FRNIMNIIDIISIIPYFATLITELVQETEPSAQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQIL 364

  Fly   334 IQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDM 398
            .||.:||.:||.||:|||.:|:::|:|.||:||..:|..|  |:|||.|.|||:|||||||||||
Human   365 GQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPESH--FSSIPDGFWWAVVTMTTVGYGDM 427

  Fly   399 APKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYY---SHTQARAKLPKKRRRVLPVEQPRQP 460
            .|.|..|..||.|||:|||||||||||||||||..:|   :..:.:..:|.:..|:|.....|..
Human   428 CPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQNIPGEIERILNSVGSRMG 492

  Fly   461 RLPGAPGGVSGCGTPGS 477
            ..........||.|..|
Human   493 STDSLNKTNGGCSTEKS 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 32/98 (33%)
BTB_2 27..117 CDD:280393 32/90 (36%)
Ion_trans 244..439 CDD:278921 102/203 (50%)
Ion_trans_2 355..429 CDD:285168 48/73 (66%)
KCNA10NP_005540.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..50
BTB_2 88..179 CDD:308049 32/98 (33%)
Ion_trans 255..467 CDD:306908 105/221 (48%)
Selectivity filter. /evidence=ECO:0000250 421..426 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..511 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.