DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and KCNA5

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_002225.2 Gene:KCNA5 / 3741 HGNCID:6224 Length:613 Species:Homo sapiens


Alignment Length:516 Identity:185/516 - (35%)
Similarity:267/516 - (51%) Gaps:81/516 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RVVLNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRT-GKL 89
            ||.:|:.|:|.||...||.:.|.|.|....:.|..:||:.|||||||:...|..:|.||:: |:|
Human   121 RVHINISGLRFETQLGTLAQFPNTLLGDPAKRLRYFDPLRNEYFFDRNRPSFDGILYYYQSGGRL 185

  Fly    90 HYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEELARKF 154
            ..|.:|...:|.:|:.|:.|....:|        :.|:.:..:           |..|:.|.|  
Human   186 RRPVNVSLDVFADEIRFYQLGDEAME--------RFREDEGFI-----------KEEEKPLPR-- 229

  Fly   155 GFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPD------ 213
                          .|.:.::|.:|:.|.||.:|:.|.:|||..|.|||::|||:|.|:      
Human   230 --------------NEFQRQVWLIFEYPESSGSARAIAIVSVLVILISIITFCLETLPEFRDERE 280

  Fly   214 -MRVPIVRNITVKTANGSNGWFLDKTQTNAHIA----------FFYIECVCNAWFTFEILVRFIS 267
             :|.|...:.....|.|:||..:....:...:|          ||.:|..|..|||||:||||.:
Human   281 LLRHPPAPHQPPAPAPGANGSGVMAPPSGPTVAPLLPRTLADPFFIVETTCVIWFTFELLVRFFA 345

  Fly   268 SPNKWEFIKSSVNIIDYIATLSFYIDLVLQ------------RFASHLENADILEFFSIIRIMRL 320
            .|:|..|.::.:||||.:|...::|.|..:            :......:..||....::|:.|:
Human   346 CPSKAGFSRNIMNIIDVVAIFPYFITLGTELAEQQPGGGGGGQNGQQAMSLAILRVIRLVRVFRI 410

  Fly   321 FKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWW 385
            |||:|||.||:||.:|.:||.:||.||:|||.:|:::|:|.||:||......|  |:|||...||
Human   411 FKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADNQGTH--FSSIPDAFWW 473

  Fly   386 ALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRR 450
            |:|||||||||||.|.|..|..||:|||:|||||||||||||||||..:| |.:...:.|    .
Human   474 AVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY-HRETDHEEP----A 533

  Fly   451 VLPVEQPRQPRLPGAPGGV---------SGCGTPGSGPHSGPMGSGGTGPRRMNNKTKDLV 502
            ||..||..|.:.||...||         |.|...|:..::.....|.....:.|.|.|..|
Human   534 VLKEEQGTQSQGPGLDRGVQRKVSGSRGSFCKAGGTLENADSARRGSCPLEKCNVKAKSNV 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 34/98 (35%)
BTB_2 27..117 CDD:280393 34/90 (38%)
Ion_trans 244..439 CDD:278921 101/216 (47%)
Ion_trans_2 355..429 CDD:285168 46/73 (63%)
KCNA5NP_002225.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..108
2 X 11 AA tandem repeat of D-[SP]-G-V-R-P-L-P-P-L-P 61..82
BTB_2 122..213 CDD:308049 34/98 (35%)
Ion_trans 249..526 CDD:306908 121/279 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..304 6/21 (29%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 418..431 6/12 (50%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 480..485 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..559 10/30 (33%)
PDZ-binding. /evidence=ECO:0000250 611..613
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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