DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shaw and Kcnk5

DIOPT Version :10

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001034605.1 Gene:Kcnk5 / 364241 RGDID:1564985 Length:503 Species:Rattus norvegicus


Alignment Length:493 Identity:96/493 - (19%)
Similarity:153/493 - (31%) Gaps:183/493 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 IWSLFDEPYSSNAAKTIGVVSVF----FICIS------ILSFCLKTHPDMRVPIVRNITVKTANG 229
            |:.:.:||:...|.|......:.    |.|:|      ||. .:....|..|.|..|.|....|.
  Rat    22 IFEVLEEPHWKEAKKNYYTQKLHLLKEFPCLSQEGLDKILQ-VVSDAADQGVAITGNQTFNNWNW 85

  Fly   230 SNGWFLDKT------------QTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNII 282
            .|......|            :|.|...|    ||....|...:.:.:||:..|           
  Rat    86 PNAMIFAATVITTIGYGNVAPKTPAGRLF----CVFYGLFGVPLCLTWISALGK----------- 135

  Fly   283 DYIATLSFYIDLVLQRFASHLENADILEFFSIIRIMRLFK-LTRHSSGLKILIQTFRASAKELTL 346
                                        ||. .|..||.: |||....|:         ..::|.
  Rat   136 ----------------------------FFG-GRAKRLGQFLTRRGVSLR---------KAQITC 162

  Fly   347 LVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAP----------- 400
            ...|:|.|:::...:..:...:.    .::|.|. ||:::.:|::|:|:||...           
  Rat   163 TAIFIVWGVLVHLVIPPFVFMVT----EEWNYIE-GLYYSFITISTIGFGDFVAGVNPSANYHAL 222

  Fly   401 -KTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRQPRLPG 464
             :.::.:::     ..|:..::|.|...||.|...:       |..|||||      .|:.... 
  Rat   223 YRYFVELWI-----YLGLAWLSLFVNWKVSMFVEVH-------KAIKKRRR------RRKESFE- 268

  Fly   465 APGGVSGCGTPGSGPHS--GPMGSGGTGPRRMNNKTKDLVSPKSVAQLFAGPLGASIVAMSPRTM 527
                        |.|||  ....:|.|..:.:|              :|      |.::....|.
  Rat   269 ------------SSPHSRKALQMAGSTASKDVN--------------IF------SFLSKKEETY 301

  Fly   528 LDLNPALAMGKPTFQ-----PRIPTPLAATPPPPVSSAGGMTASGIGTTSATGATSAPQPATPL- 586
            .||  ...:||...:     .|:|.|                ..|:|.....|..|.|....|| 
  Rat   302 NDL--IKQIGKKAMKTSGGGERVPGP----------------GHGLGAQGGDGLPSIPASLAPLV 348

  Fly   587 -------PSI-AVSTT----ASVGKDLGISTTTTTAQE 612
                   ||: .||.|    ..|.:.||......|.:|
  Rat   349 VYSKNRVPSLEEVSQTLRNKGHVSRPLGEDAAAQTPKE 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB_Shaw-like 24..135 CDD:349723
Ion_trans 188..439 CDD:459842 51/285 (18%)
PRK14959 <418..>585 CDD:184923 34/173 (20%)
Kcnk5NP_001034605.1 Ion_trans_2 <83..137 CDD:462301 12/96 (13%)
Ion_trans_2 171..243 CDD:462301 11/81 (14%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.