Sequence 1: | NP_001137782.1 | Gene: | Shaw / 33599 | FlyBaseID: | FBgn0003386 | Length: | 619 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001128115.2 | Gene: | Kcnq5 / 259273 | RGDID: | 628848 | Length: | 951 | Species: | Rattus norvegicus |
Alignment Length: | 273 | Identity: | 66/273 - (24%) |
---|---|---|---|
Similarity: | 114/273 - (41%) | Gaps: | 58/273 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 219 VRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNIID 283
Fly 284 YIATLSFYIDLVLQ-----------------RFA------------------------SHLENAD 307
Fly 308 ILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFAS-LVYYAERIQPN 371
Fly 372 PHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYS 436
Fly 437 HTQARAKLPKKRR 449 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Shaw | NP_001137782.1 | BTB | 27..125 | CDD:197585 | |
BTB_2 | 27..117 | CDD:280393 | |||
Ion_trans | 244..439 | CDD:278921 | 56/236 (24%) | ||
Ion_trans_2 | 355..429 | CDD:285168 | 28/74 (38%) | ||
Kcnq5 | NP_001128115.2 | Ion_trans | 159..357 | CDD:278921 | 46/202 (23%) |
Ion_trans_2 | 273..347 | CDD:285168 | 28/76 (37%) | ||
KCNQ_channel | 471..659 | CDD:281513 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG2126 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |