DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shaw and Kcng2

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001177302.1 Gene:Kcng2 / 240444 MGIID:3694646 Length:480 Species:Mus musculus


Alignment Length:487 Identity:155/487 - (31%)
Similarity:224/487 - (45%) Gaps:85/487 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VVLNVGGIRHETYKATLKKIPATRLSRL------TEALA---NYDPILNEYFFDRHPGVFAQVLN 82
            |::||||.|.....|.|.:.|..||.||      .|.|.   :||...:|:||||.|..|..::.
Mouse    33 VIINVGGCRVRLAWAALARCPLARLERLRACRGHDELLRVCDDYDVSRDEFFFDRSPCAFRAIVA 97

  Fly    83 YYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSE 147
            ..|.|||......|...|.:||.:||:|..::|.||                |.||....|:.:|
Mouse    98 LLRAGKLRLLRGPCALAFRDELAYWGIDEARLERCC----------------LRRLRRREEEAAE 146

  Fly   148 EELA-----------RKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICI 201
            ...|           |..|      .|.:   :..:.|:..:.:.|:|..|.:....|||.|:.:
Mouse   147 ASAAQPARGPPTSPGRALG------SGRL---ERGRQRLRDVVENPHSGLAGRLFAYVSVAFVAV 202

  Fly   202 SILSFCLKTHPDMRVPIVR-NITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRF 265
            :.:..||.|.||:|....| ..:.|..|                 .|.:|.||.|||:||.|:|.
Mouse   203 TAVGLCLSTMPDVRAEEERGECSTKCRN-----------------LFVLETVCVAWFSFEFLLRS 250

  Fly   266 ISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFA-----SHLENAD-ILEFFSIIRIMRLFKLT 324
            :.:.:|..|:::.:.|||.:|.|.||:.|:....|     ..||.|. :|.....:|::.:.:|.
Mouse   251 LQAESKCAFLRTPLAIIDILAILPFYVSLLAGLAAGPTGSKMLERAGLVLRLLRALRVLYVMRLA 315

  Fly   325 RHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVT 389
            |||.||:.|..|.|..|:|..||:.||.:.:.:||.||:.||| :...|.||:|:|...|||:::
Mouse   316 RHSLGLRSLGLTVRRCAREFGLLLLFLCVAMALFAPLVHLAER-ELGAHRDFSSVPASYWWAVIS 379

  Fly   390 MTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYS---HTQARAKLPK----- 446
            |||||||||.|::..|..|.....|:|:|.:|.||..|...|:..||   ..|.||..|:     
Mouse   380 MTTVGYGDMVPRSLPGQVVALSSILSGILLMAFPVTSIFHTFSRSYSELKEQQQRAASPEPALRE 444

  Fly   447 ------KRRRVLPVEQPRQ-PRLPGAPGGVSG 471
                  ..|.....|...| |...||.|.:.|
Mouse   445 DSTRDDSTRSASATEDSSQDPETAGAAGSLPG 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 38/106 (36%)
BTB_2 27..117 CDD:280393 36/98 (37%)
Ion_trans 244..439 CDD:278921 79/203 (39%)
Ion_trans_2 355..429 CDD:285168 34/73 (47%)
Kcng2NP_001177302.1 BTB_POZ 33..127 CDD:365784 35/93 (38%)
Ion_trans 190..429 CDD:395416 92/256 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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