DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and egl-23

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001255775.1 Gene:egl-23 / 178358 WormBaseID:WBGene00001190 Length:726 Species:Caenorhabditis elegans


Alignment Length:773 Identity:141/773 - (18%)
Similarity:225/773 - (29%) Gaps:304/773 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AHAAMNLINMDS-ENRVV-------------LNVGGIRHETYKATLKKIPATRLSRLTEALANYD 62
            |:|....:.|.| |:|.|             :|:...:|.....||::....|......||.:: 
 Worm    70 AYAIFGALVMRSLESRTVTSIEKKTDVHRRHVNLTNFQHPPTPITLEQRHRRRRRHNETALEDH- 133

  Fly    63 PILNEYFFDRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPC--CWMTYTQH 125
              |:|. ..|.....|.::   |:.|.  ...|...:...|..|..||...|:..  |:....:|
 Worm   134 --LSEK-LSREKRAAAHIM---RSRKC--VISVIKKMSSMECSFDTLDEKLVKALDECYHVAVEH 190

  Fly   126 RDTQETLAVLDRLDLDTEKPSEEELARKFGFEEDYYKGTISWWQEMKPRIWS---LFDEPYSSNA 187
             :|.....:......:.|...||.       |||     :|.|..|...:::   :....|.:.|
 Worm   191 -NTHVNHVLFTNSKEEVESVGEEA-------EED-----VSEWSFMDSLLFAFTVITTIGYGNVA 242

  Fly   188 AKTI---------GVVSVFFICISIL--------------SFCLKTHPDMRVPIVRNITVKTANG 229
            .:|.         |::.:.|..::|.              |||.||...::              
 Worm   243 PRTFGGRLFVIGYGLIGIPFTLLAIADLGKFISEMMVEAKSFCRKTWKKLK-------------- 293

  Fly   230 SNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDL 294
                                    .||           :||   ||:                  
 Worm   294 ------------------------KAW-----------NPN---FIR------------------ 302

  Fly   295 VLQRFASHLENADILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFA 359
                 |..|.|.||.|     :|:...|:.......::..:....:..|.|.| |.|.|..:.|.
 Worm   303 -----AKDLSNTDIEE-----KILDNEKIENEPETSEVSEEEDDLTETEATSL-FILFLVYIAFG 356

  Fly   360 SLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPK--TYIGMFVGALCALAGVLTIAL 422
            ..:..|.    .|..||..   .:::..||:|::|.||:.|:  ||:.:.:..:.....:.|||:
 Worm   357 GFMLAAY----EPDMDFFK---AVYFNFVTLTSIGLGDIVPRSETYMLITIVYIAIGLALTTIAI 414

  Fly   423 PVPV--------------IVSNFAMYYSHTQARAK-----------LPKKRRRVL---------- 452
            .:..              .|.|.|:::...:...|           ||....:.|          
 Worm   415 EIAADALKKLHYFGRKIENVGNVAIWFGGKKITMKALVKNLGDQFNLPTTVVKNLNLDHFVDQAI 479

  Fly   453 ------------PVEQPRQPRLPGAPGGVSGC-----GTPGSGPHSGPMGSGGTGPRRMNNKTKD 500
                        |..:|...|..........|     .||...|...|:              ..
 Worm   480 KVEEGEIETLRPPPYEPPSDRFEAEFADEPECEWIRDPTPTPPPSPQPV--------------YR 530

  Fly   501 LVSPKSVAQLFAGPLGASIVAMSPRTMLDLNPALAMGKPTFQ----------------------- 542
            |.|||.|.   ..||      .|| |:.|::.|:|...|...                       
 Worm   531 LPSPKPVT---PEPL------PSP-TITDVSLAIATPSPEESDDDQELILPSPEPSPVREPTPPP 585

  Fly   543 -PRIPTPLAAT-----------PPPPVSSAGGMTASGI--------------------------- 568
             ||.|||...|           ||||.:....:||:.|                           
 Worm   586 PPREPTPREPTPEPEPVREPTPPPPPPAKPRPLTAAEIAAQKRKAYSEEAWRRYQEYQKQWKKFR 650

  Fly   569 ---------GTTSATGATSAPQPATPLPSIAVSTTASVGKDLGISTTTTTAQETSKKA 617
                     |.:::..:||.|...:|.....|.|..|....   |.|:..:.:||:.|
 Worm   651 QTQKTPAPSGASTSGASTSKPSGTSPESGAGVCTGPSTRSQ---SITSVASGKTSRSA 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 21/112 (19%)
BTB_2 27..117 CDD:280393 20/102 (20%)
Ion_trans 244..439 CDD:278921 40/210 (19%)
Ion_trans_2 355..429 CDD:285168 17/89 (19%)
egl-23NP_001255775.1 Ion_trans_2 216..276 CDD:285168 10/64 (16%)
Ion_trans_2 347..423 CDD:285168 19/82 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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