DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shaw and KCNG3

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_579875.1 Gene:KCNG3 / 170850 HGNCID:18306 Length:436 Species:Homo sapiens


Alignment Length:448 Identity:152/448 - (33%)
Similarity:225/448 - (50%) Gaps:67/448 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VVLNVGGIRHETYKATLKKIPATRLSRL---------TEALANYDPILNEYFFDRHPGVFAQVLN 82
            |||||||.|:...:..||..|..|:|||         .|...:||...||||||||...|..:|.
Human    11 VVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNEYFFDRHSEAFGFILL 75

  Fly    83 YYR-TGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWM--------TYTQHRDTQETLAVLDRL 138
            |.| .|||.:...:|...|..|:.:|||:...:|.||..        |||.:  :.:...||.| 
Human    76 YVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCCQRRLDDRMSDTYTFY--SADEPGVLGR- 137

  Fly   139 DLDTEKPSEEELA--RKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICI 201
              |..:|...|.|  |:             |.:.|:    ..|:||.||.||:.:..|||.|:.:
Human   138 --DEARPGGAEAAPSRR-------------WLERMR----RTFEEPTSSLAAQILASVSVVFVIV 183

  Fly   202 SILSFCLKTHPDMRVPIVRNITVKTANGSNGWFLDKTQTNA---HIAFFYIECVCNAWFTFEILV 263
            |::..|..|.||.|          .|...|....|:::.:|   ......||.:|..|||.|.:|
Human   184 SMVVLCASTLPDWR----------NAAADNRSLDDRSRYSAGPGREPSGIIEAICIGWFTAECIV 238

  Fly   264 RFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFA---SHLENADILEFFSIIRIMRLF---K 322
            |||.|.||.||:|..:||||.:|...:||.:::..|.   |.|:.|.:.  ..::|:||:|   |
Human   239 RFIVSKNKCEFVKRPLNIIDLLAITPYYISVLMTVFTGENSQLQRAGVT--LRVLRMMRIFWVIK 301

  Fly   323 LTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAER---IQPNPHNDFNSIPLGLW 384
            |.||..||:.|..|.:...:|:.:|:.|:.:.:.||::|....|.   ::.: :.||.|||...|
Human   302 LARHFIGLQTLGLTLKRCYREMVMLLVFICVAMAIFSALSQLLEHGLDLETS-NKDFTSIPAACW 365

  Fly   385 WALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARA 442
            |.:::|||||||||.|.|..|..:|.:|.::|::.:|||:..|..:|...|...:.|:
Human   366 WVIISMTTVGYGDMYPITVPGRILGGVCVVSGIVLLALPITFIYHSFVQCYHELKFRS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 45/115 (39%)
BTB_2 27..117 CDD:280393 40/99 (40%)
Ion_trans 244..439 CDD:278921 75/203 (37%)
Ion_trans_2 355..429 CDD:285168 30/76 (39%)
KCNG3NP_579875.1 BTB_POZ_KCNG3 11..122 CDD:349729 42/110 (38%)
Ion_trans 219..420 CDD:395416 75/203 (37%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 373..378 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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