DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and Kcnk7

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_034739.2 Gene:Kcnk7 / 16530 MGIID:1341841 Length:343 Species:Mus musculus


Alignment Length:251 Identity:48/251 - (19%)
Similarity:77/251 - (30%) Gaps:115/251 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 LTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPK------- 401
            |...||.|:..:|::.        :|.:     .|:...:::...:::|:|.||:.|.       
Mouse   177 LVACVFMLLPALVLWG--------VQGD-----CSLLEAIYFCFGSLSTIGLGDLLPAHGRGLHP 228

  Fly   402 --TYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRQPRLPG 464
              .::|.|     ||.|.|.:.|        .||..: .:..::||:.|..|             
Mouse   229 AIYHLGQF-----ALLGYLLLGL--------LAMLLA-VETFSELPQVRAMV------------- 266

  Fly   465 APGGVSGCGTPGSGPHSGPMGSGGTGPRRMNNKTKDLVSPKSVAQLFAGPLGASIVAMSPRTMLD 529
                          ...||.||       ..::.:|            |.||...:|:|      
Mouse   267 --------------KFFGPSGS-------RTDEDQD------------GILGQDELALS------ 292

  Fly   530 LNPALAMGKPTFQPRIPTPLAATPPPPVSSAGGMTASGIGTTSATGATSAPQPATP 585
                      |..|..|. |..|.|..||.                ..:.||||.|
Mouse   293 ----------TVLPDAPV-LGPTTPASVSE----------------HQNRPQPADP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585
BTB_2 27..117 CDD:280393
Ion_trans 244..439 CDD:278921 21/103 (20%)
Ion_trans_2 355..429 CDD:285168 15/82 (18%)
Kcnk7NP_034739.2 Ion_trans_2 <89..140 CDD:285168
Ion_trans_2 178..>225 CDD:285168 11/59 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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