DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shaw and AgaP_AGAP008202

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_317265.4 Gene:AgaP_AGAP008202 / 1277769 VectorBaseID:AGAP008202 Length:558 Species:Anopheles gambiae


Alignment Length:549 Identity:319/549 - (58%)
Similarity:366/549 - (66%) Gaps:116/549 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YIPKKMQHYAHAAMNLINMD-SENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILN 66
            :..|.:.:..||.::::..: |:..::|          ||||||||||||||||||||||||:||
Mosquito    12 FTTKCLFNLLHAFLSILTQEMSQINLIL----------KATLKKIPATRLSRLTEALANYDPVLN 66

  Fly    67 EYFFDRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQET 131
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||:.|||||.|
Mosquito    67 EYFFDRHPGVFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSVHRDTQST 131

  Fly   132 LAVLDRLDLDTEKPSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSV 196
            ||:||:|:||.|:||||.:||.|||||....|.::.||..||:||:|||||.||..||.:..:||
Mosquito   132 LAILDKLELDDEQPSEEAIARLFGFEEALLNGELTCWQRTKPKIWALFDEPSSSTGAKIVAGISV 196

  Fly   197 FFICISILSFCLKTHPDMRV--PIVRNITVKTANGS----------------------------- 230
            ||||||::||||||||.:||  |.:.||   |.|||                             
Mosquito   197 FFICISVISFCLKTHPGLRVEIPAILNI---TTNGSASVLPDGLPTTLDELLDHGRLDELLLDYG 258

  Fly   231 ----------------------------------------------------------NGWFLDK 237
                                                                      ..|  .:
Mosquito   259 APTGTGGTASTSTTTTTTSATTESHSASPTRPETTTQRTGRIVSSAYRMNSGKGASIVENW--QE 321

  Fly   238 TQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASH 302
            |....|.||||:|.|||.||..|:.||.:       ||||.|||||..||||||.| |.||..  
Mosquito   322 TYGQPHEAFFYVELVCNVWFIIELTVRLV-------FIKSPVNIIDLAATLSFYTD-VCQRMG-- 376

  Fly   303 LENADILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAER 367
             |...:||.|||:||:|||||||||.||:|||.||:|||:||||||||||||||:|||||||||:
Mosquito   377 -EQTGLLEAFSIVRILRLFKLTRHSPGLRILIHTFKASARELTLLVFFLVLGIVVFASLVYYAEK 440

  Fly   368 IQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFA 432
            :|.||.|.|.|||||||||:||||||||||||||||:|||||||||||||||||||||||||||:
Mosquito   441 LQDNPDNQFKSIPLGLWWAIVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFS 505

  Fly   433 MYYSHTQARAKLPKKRRRVLPVEQPRQPR 461
            |:|||||||:||||||||||||||||:.|
Mosquito   506 MFYSHTQARSKLPKKRRRVLPVEQPRRKR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 82/97 (85%)
BTB_2 27..117 CDD:280393 76/89 (85%)
Ion_trans 244..439 CDD:278921 143/194 (74%)
Ion_trans_2 355..429 CDD:285168 64/73 (88%)
AgaP_AGAP008202XP_317265.4 BTB_2 38..117 CDD:280393 76/88 (86%)
BTB 40..119 CDD:197585 77/78 (99%)
Ion_trans 321..512 CDD:278921 145/201 (72%)
Ion_trans_2 <455..505 CDD:285168 47/49 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48788
OrthoDB 1 1.010 - - D22145at7147
OrthoFinder 1 1.000 - - FOG0000990
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X19
TreeFam 00.000 Not matched by this tool.
65.830

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