DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and LOC100494007

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_002938608.1 Gene:LOC100494007 / 100494007 -ID:- Length:500 Species:Xenopus tropicalis


Alignment Length:441 Identity:134/441 - (30%)
Similarity:226/441 - (51%) Gaps:59/441 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LNVGGIRHETYKATLKKIPATRLSRLT---------EALANYDPILNEYFFDRHPGVFAQVLNYY 84
            |||||.:.:.......:.|:||:.:|.         :...::...:|||||||.|.||..:.::|
 Frog    69 LNVGGKKFQIDYRVAARYPSTRIGKLAACSDLVKRLDLCDDFSVQMNEYFFDRDPVVFYYIFHFY 133

  Fly    85 RTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEE 149
            |.|.|....::|...|.||:|:|||.....:.||.:.:.:|:|     .:::.  :.||:..:.|
 Frog   134 RCGILWIMDELCPHNFLEEIEYWGLHLKYTQRCCHILFEEHQD-----EIMEY--IKTERDLQAE 191

  Fly   150 LARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDM 214
            :.|.  ..|.:::|  .|..:.|.::|:|.:.||||..||.|.|:|..|:.|||::.||.|..: 
 Frog   192 VERH--DHEKHFEG--KWLGDFKIKMWNLVENPYSSVQAKIIAVLSSIFVLISIVAMCLSTVDE- 251

  Fly   215 RVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSV 279
                                |..|..|......|:|.||..:||.|.::|..|:|:...|:::::
 Frog   252 --------------------LQDTSVNGKAYMEYVETVCVIFFTVEYIMRLFSTPDVKRFLRTAM 296

  Fly   280 NIIDYIATLSFYIDLVLQRFAS----HLENADI------------LEFFSIIRIMRLFKLTRHSS 328
            ||:|.:|.|.|||.::.:.||.    ||.:.||            |:...::||.|:.||.|||:
 Frog   297 NIVDLVAILPFYIQIIFESFAEDVEIHLHHGDIEKMERLGQVGKMLKIIRLMRIFRILKLARHST 361

  Fly   329 GLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTV 393
            ||:....|.|...:::..|..|:.:||..|::|::..|...|.  ..|.|||...|||.|:::||
 Frog   362 GLRAFGFTIRQCYQQVCCLFLFIAMGIFTFSALMHSVEHDVPG--TSFTSIPGTWWWAAVSISTV 424

  Fly   394 GYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKL 444
            ||||..|.:::|..|..||...|::...:|:.::.:.|:.:|:..:|...:
 Frog   425 GYGDTVPNSFLGRIVAFLCISFGIILNGMPISILYNRFSDFYAKLKAHESM 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 33/104 (32%)
BTB_2 27..117 CDD:280393 31/96 (32%)
Ion_trans 244..439 CDD:278921 69/210 (33%)
Ion_trans_2 355..429 CDD:285168 26/73 (36%)
LOC100494007XP_002938608.1 BTB_POZ 67..173 CDD:365784 33/103 (32%)
Ion_trans 226..470 CDD:366146 84/266 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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