DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and kcna7

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_002939286.2 Gene:kcna7 / 100491458 XenbaseID:XB-GENE-992813 Length:489 Species:Xenopus tropicalis


Alignment Length:461 Identity:176/461 - (38%)
Similarity:257/461 - (55%) Gaps:67/461 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DSENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRT 86
            |...|||:||.|:|.||...||.:.|.|.|......:..:||:.|||||||:...|..:|.:|::
 Frog    33 DCCERVVINVSGLRFETQIRTLHRFPDTLLGDPRRRIHFFDPLRNEYFFDRNRPCFDSILYFYQS 97

  Fly    87 -GKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEEL 150
             |:|..||:|...:|.|||.|:.|..|.:                                    
 Frog    98 GGRLRRPTNVPLDVFMEELLFYQLGDNVI------------------------------------ 126

  Fly   151 ARKFGFEEDYYKGTISWWQEMKP------RIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLK 209
             |||..:|.:.|..    :.:.|      ::|.||:.|.||:||:.|.::||..|.|||:.|||:
 Frog   127 -RKFREDEGFMKEE----ERLLPECEFMKQVWLLFEHPDSSSAARIIAIISVMVILISIVIFCLE 186

  Fly   210 THPDMRVPIVRNITVKTA-NGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWE 273
            |.|:.|..  |::::..| :.:|.....|.::.....||.:|.:|..||:||:.||||:.|:|..
 Frog   187 TLPEFRDD--RDLSLPVAPHRANSTHHFKEKSPFEDPFFIVETICICWFSFELSVRFIACPSKAA 249

  Fly   274 FIKSSVNIIDYIATLSFYIDLVLQRFASH------LENADILEFFSIIRIMRLFKLTRHSSGLKI 332
            |.|..:|:||::|.:.:::.|..: .|.|      ..:..||....::|:.|:|||:|||.||:|
 Frog   250 FFKDIMNMIDFVAIIPYFVALGTE-LARHKGVGQPAMSLAILRVIRLVRVFRIFKLSRHSKGLQI 313

  Fly   333 LIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHND--FNSIPLGLWWALVTMTTVGY 395
            |.||.:||.:||.||:|||.:|:::|:|.||:||.    .|.|  |.|||...|||:||||||||
 Frog   314 LGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEA----DHEDTKFTSIPEAFWWAVVTMTTVGY 374

  Fly   396 GDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRV--LPVEQPR 458
            |||:|:|..|..||:|||:||||||:||||||||||:.:| |.:.......:...|  .|...|.
 Frog   375 GDMSPETVGGKLVGSLCAIAGVLTISLPVPVIVSNFSYFY-HRETECSDIGQYNHVGSCPNGPPH 438

  Fly   459 QPRLPG 464
            .|::.|
 Frog   439 TPKIKG 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 37/98 (38%)
BTB_2 27..117 CDD:280393 37/90 (41%)
Ion_trans 244..439 CDD:278921 101/202 (50%)
Ion_trans_2 355..429 CDD:285168 46/75 (61%)
kcna7XP_002939286.2 BTB_POZ 36..162 CDD:365784 48/166 (29%)
Ion_trans 165..417 CDD:366146 119/259 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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