DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and XB5727110

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_031747981.1 Gene:XB5727110 / 100486031 XenbaseID:XB-GENE-5727111 Length:318 Species:Xenopus tropicalis


Alignment Length:198 Identity:41/198 - (20%)
Similarity:67/198 - (33%) Gaps:58/198 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 KTQTNAHIAFFYIECVCNAWFTFEILVRFI----------------SSPNKWE------FIKSSV 279
            ||.|..|...|.....|......:.||..|                :|.:.|:      |..:.|
 Frog    39 KTDTERHRLDFLKNYTCLTKEALDHLVNVITDAVKQGIHPLENQTKNSHSNWDMSSSFFFAGTVV 103

  Fly   280 NIIDYIATLS-----FYIDLVLQRFASHLENADILEFFSIIRIMRLFKLTRHSSGLKILIQTFRA 339
            ..|.| .|||     ..|..||........|..:|.     |:.::.....|..|.....:..:.
 Frog   104 TTIGY-GTLSPRTPGGQIFCVLYALFGIPLNVIVLG-----RVGKILSRVCHRLGQYFFNKGMKP 162

  Fly   340 SAKELTLLVFFLVLGIVIFASLV----------YYAERIQPNPHNDFNSIPLGLWWALVTMTTVG 394
            ...::..::||.|.||::|..|.          .|.|               |:::|.::::|:|
 Frog   163 KKAKVLTIIFFSVTGIIVFLGLPPLLFTKTEKWTYTE---------------GVYYAFISLSTIG 212

  Fly   395 YGD 397
            :||
 Frog   213 FGD 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585
BTB_2 27..117 CDD:280393
Ion_trans 244..439 CDD:278921 37/191 (19%)
Ion_trans_2 355..429 CDD:285168 11/53 (21%)
XB5727110XP_031747981.1 Ion_trans_2 86..146 CDD:400301 15/65 (23%)
Ion_trans_2 178..245 CDD:400301 11/53 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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