DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and kcng3

DIOPT Version :10

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_002932441.1 Gene:kcng3 / 100485370 XenbaseID:XB-GENE-981630 Length:431 Species:Xenopus tropicalis


Alignment Length:430 Identity:137/430 - (31%)
Similarity:220/430 - (51%) Gaps:51/430 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LNVGGIRHETYKATLKKIPATRLSRL---------TEALANYDPILNEYFFDRHPGVFAQVLNYY 84
            |||||.|:...:..:|..|..|:|||         .|...:||...||||||||...|..::.|.
 Frog    10 LNVGGARYSFSQEVIKDFPLRRVSRLHGCSSEQDVLEVCDDYDQERNEYFFDRHSEAFGFIMMYV 74

  Fly    85 RTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEE 149
            :.|||.:...:|...|..|:.:|||:.:|:|.||      .|...|.::.......|..|| :|.
 Frog    75 KYGKLRFVPQMCELSFYNEMIYWGLERSQLEYCC------QRRLDERMSDTYTYMSDESKP-DES 132

  Fly   150 LARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDM 214
            ...|...::...:|...  ::.|.|:...|:||.||.||:.:.|:|:.|:.:|::..|..|.||.
 Frog   133 CNLKDEQQQQQQQGPSD--KKWKERMRITFEEPTSSLAAQILAVISIIFVIVSMVVLCASTLPDW 195

  Fly   215 RVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFY-----IECVCNAWFTFEILVRFISSPNKWEF 274
                      |||...:      .:.:.:.|..:     ||.:|..|||.|.:||||.|.:|.||
 Frog   196 ----------KTAQNHS------AEEHRYTASLWEPSGIIEAICIGWFTAECIVRFIVSKDKCEF 244

  Fly   275 IKSSVNIIDYIATLSFYIDLVLQRFAS---HLENADILEFFSIIRIMRLF---KLTRHSSGLKIL 333
            :|..:||||.:|...:|:.:::..|..   .|:.|.:.  ..::|:||:|   ||.||..||:.|
 Frog   245 VKRPLNIIDLLAITPYYVSVLMTVFTGENPQLQRAGVT--LRVLRMMRIFWVIKLARHFIGLQTL 307

  Fly   334 IQTFRASAKELTLLVFFLVLGIVIFASLVYYAER---IQPNPHNDFNSIPLGLWWALVTMTTVGY 395
            ..|.:...:|:.:|:.|:.:.:.||.:|....|.   ::.. :.|::|||...||.:::||||||
 Frog   308 GLTLKRCYREMVMLLVFICVAMAIFGALSQLLEHGLDLEAK-NEDYSSIPAACWWVIISMTTVGY 371

  Fly   396 GDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYY 435
            |||.|.:..|..:|.:|.::|::.:|||:..|..:|...|
 Frog   372 GDMYPISVPGRILGGVCVVSGIVLLALPITFIYHSFVQCY 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB_Shaw-like 24..135 CDD:349723 40/114 (35%)
Ion_trans 188..439 CDD:459842 83/262 (32%)
PRK14959 <418..>585 CDD:184923 6/18 (33%)
kcng3XP_002932441.1 BTB_POZ_KCNG3 8..118 CDD:349729 40/113 (35%)
Ion_trans 169..415 CDD:459842 83/262 (32%)

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