DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and kcng3

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_002932441.1 Gene:kcng3 / 100485370 XenbaseID:XB-GENE-981630 Length:431 Species:Xenopus tropicalis


Alignment Length:430 Identity:137/430 - (31%)
Similarity:220/430 - (51%) Gaps:51/430 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LNVGGIRHETYKATLKKIPATRLSRL---------TEALANYDPILNEYFFDRHPGVFAQVLNYY 84
            |||||.|:...:..:|..|..|:|||         .|...:||...||||||||...|..::.|.
 Frog    10 LNVGGARYSFSQEVIKDFPLRRVSRLHGCSSEQDVLEVCDDYDQERNEYFFDRHSEAFGFIMMYV 74

  Fly    85 RTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDLDTEKPSEEE 149
            :.|||.:...:|...|..|:.:|||:.:|:|.||      .|...|.::.......|..|| :|.
 Frog    75 KYGKLRFVPQMCELSFYNEMIYWGLERSQLEYCC------QRRLDERMSDTYTYMSDESKP-DES 132

  Fly   150 LARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFICISILSFCLKTHPDM 214
            ...|...::...:|...  ::.|.|:...|:||.||.||:.:.|:|:.|:.:|::..|..|.||.
 Frog   133 CNLKDEQQQQQQQGPSD--KKWKERMRITFEEPTSSLAAQILAVISIIFVIVSMVVLCASTLPDW 195

  Fly   215 RVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFY-----IECVCNAWFTFEILVRFISSPNKWEF 274
                      |||...:      .:.:.:.|..:     ||.:|..|||.|.:||||.|.:|.||
 Frog   196 ----------KTAQNHS------AEEHRYTASLWEPSGIIEAICIGWFTAECIVRFIVSKDKCEF 244

  Fly   275 IKSSVNIIDYIATLSFYIDLVLQRFAS---HLENADILEFFSIIRIMRLF---KLTRHSSGLKIL 333
            :|..:||||.:|...:|:.:::..|..   .|:.|.:.  ..::|:||:|   ||.||..||:.|
 Frog   245 VKRPLNIIDLLAITPYYVSVLMTVFTGENPQLQRAGVT--LRVLRMMRIFWVIKLARHFIGLQTL 307

  Fly   334 IQTFRASAKELTLLVFFLVLGIVIFASLVYYAER---IQPNPHNDFNSIPLGLWWALVTMTTVGY 395
            ..|.:...:|:.:|:.|:.:.:.||.:|....|.   ::.. :.|::|||...||.:::||||||
 Frog   308 GLTLKRCYREMVMLLVFICVAMAIFGALSQLLEHGLDLEAK-NEDYSSIPAACWWVIISMTTVGY 371

  Fly   396 GDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYY 435
            |||.|.:..|..:|.:|.::|::.:|||:..|..:|...|
 Frog   372 GDMYPISVPGRILGGVCVVSGIVLLALPITFIYHSFVQCY 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 38/104 (37%)
BTB_2 27..117 CDD:280393 36/96 (38%)
Ion_trans 244..439 CDD:278921 71/206 (34%)
Ion_trans_2 355..429 CDD:285168 28/76 (37%)
kcng3XP_002932441.1 BTB_POZ_KCNG3 8..118 CDD:349729 40/113 (35%)
Ion_trans 169..415 CDD:366146 83/262 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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