DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shaw and si:dkey-43k4.5

DIOPT Version :9

Sequence 1:NP_001137782.1 Gene:Shaw / 33599 FlyBaseID:FBgn0003386 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_017212096.1 Gene:si:dkey-43k4.5 / 100148290 ZFINID:ZDB-GENE-120215-82 Length:487 Species:Danio rerio


Alignment Length:459 Identity:133/459 - (28%)
Similarity:233/459 - (50%) Gaps:50/459 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MDSENRVV-LNVGGIRHETYKATLKKIPATRLSRL---------TEALANYDPILNEYFFDRHPG 75
            :|.::.:: :||||:|:....:.|||.|.|||.:|         .:...::|....|::|||:||
Zfish    11 LDPKDHLLHINVGGLRNTLCSSILKKFPDTRLGQLLSCDSEDDILQLCDDFDVQRKEFYFDRNPG 75

  Fly    76 VFAQVLNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLDRLDL 140
            :|..||::|:|||||...::|...|.:|:|:||:....::.||...|...:..:...:..:..|:
Zfish    76 LFPYVLHFYQTGKLHIMEELCIFSFSQEIEYWGISDFFLDSCCSYRYLDRKLERHHKSWDEESDV 140

  Fly   141 DTEKPSEEELARKFGFEEDYYKGTISWWQEM-----KPRIWSLFDEPYSSNAAKTIGVVSVFFIC 200
            .:...|.:|::       |..| .|..:.||     :..:|...:.|..|..:|...::|:..:.
Zfish   141 SSVDTSVDEIS-------DLNK-DIEHFHEMRFGNIRKCLWLTLENPGYSIPSKLFSLLSICVVL 197

  Fly   201 ISILSFCLKTHPDMRVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRF 265
            |||.:.|:.:.|:.:           ....||..::  ....|:    :|..|..|||||::.|.
Zfish   198 ISIATMCINSIPEYQ-----------KFDENGNLIE--DPTMHV----LEVFCICWFTFEVVTRM 245

  Fly   266 ISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQR-FASHLENADILEFFSIIRIMRLF---KLTRH 326
            :.:||..:|....:|:||.|:.:..||.:.... ..|..|..::.:...::|:||:|   ||.||
Zfish   246 LLAPNHRKFFLLPLNVIDIISVMPIYITIFFDMLIGSESELGNLGKLVQVLRLMRIFRVLKLARH 310

  Fly   327 SSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHN-DFNSIPLGLWWALVTM 390
            |:||:.|..|.|.|.:|:.:|:.:|.:|:.:|:.:.|.||    |..: ..::||...||..|:|
Zfish   311 STGLRSLGATLRHSYREVGILLLYLAVGVSVFSGMAYTAE----NEEDVGLDTIPACWWWGTVSM 371

  Fly   391 TTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQA-RAKLPKKRRRVLPV 454
            |||||||:.|.|..|....:.|.|.|.|.:|||:.:|.:.|:.:|...:| .|.:.....:...:
Zfish   372 TTVGYGDVVPVTVAGKLAASGCILGGTLVVALPITIIFNKFSHFYRKQKALEASVRNNNNKKFVM 436

  Fly   455 EQPR 458
            .|.|
Zfish   437 RQQR 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawNP_001137782.1 BTB 27..125 CDD:197585 38/107 (36%)
BTB_2 27..117 CDD:280393 35/99 (35%)
Ion_trans 244..439 CDD:278921 69/199 (35%)
Ion_trans_2 355..429 CDD:285168 29/74 (39%)
si:dkey-43k4.5XP_017212096.1 BTB_2 20..117 CDD:308049 35/96 (36%)
Ion_trans 185..420 CDD:306908 79/255 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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