DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2818 and GDE1

DIOPT Version :10

Sequence 1:NP_608804.1 Gene:CG2818 / 33597 FlyBaseID:FBgn0031566 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_015215.1 Gene:GDE1 / 855994 SGDID:S000006031 Length:1223 Species:Saccharomyces cerevisiae


Alignment Length:551 Identity:145/551 - (26%)
Similarity:225/551 - (40%) Gaps:131/551 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 SNDTHDTKENGGESSTAFAFSEVVTLSADECEIRSQEQFGTGCGPT----------------DLV 270
            ||||.:...:...||.|.|  :|:.|..| |.:    .....|..:                |.|
Yeast   700 SNDTRNKSPSISLSSEALA--KVIGLETD-CAL----SLVISCNDSIDKSSVILDLPLDDNVDAV 757

  Fly   271 IFHLTVG-DFENTAYLIDLYSYSSRVAKE----DGPPNHLGYHYVLP---NLFKRS--------- 318
            .|.:... |:.:|.|...:.:|.:|..:.    |...|:  .:||:.   ::..:|         
Yeast   758 DFKVPFKVDYSHTLYFDIVPTYGTRSLETHNRIDCQKNN--NNYVMARGVSMLNKSYSSVGVNRS 820

  Fly   319 --EGNLELPITCAKGHRPLGMMRLGYLIVKPSSLCAL-MDMSVSYARYWNSKWTGLDVGHRGSGT 380
              .|::.:||........||.::..|:|:.|.....| ::.:.:   ||.|..:...:||||.|.
Yeast   821 ILNGSVTVPIIANHTLEILGTLKFEYIIITPFEHPQLPLERTET---YWKSLVSTRVIGHRGLGK 882

  Fly   381 SFKAKDAVIRENTITSLKNAAEHGADMVEFDVQLSKDLVPVVYHDFMIYVSLKSKCSLQEHDFLA 445
            :...|...|.|||:.|...||..||..|||||||:||.||||||||::           ....:.
Yeast   883 NNPNKSLQIGENTVESFIMAASLGASYVEFDVQLTKDNVPVVYHDFLV-----------AETGVD 936

  Fly   446 LPMRELSLEQ---LKKLKVYHIAEGLS-----------------------------RETRSFHND 478
            :||.||:|||   |......||..|..                             |.....|::
Yeast   937 IPMHELTLEQFLDLNNADKEHIQRGAGHSPHHVNGADTALQKYRGRSVDDSDVSTLRRAWDLHDN 1001

  Fly   479 D-----------------------------CLEH---QPFPQLCDVLDALDVHVGFNIEIKWSQR 511
            |                             ...|   ..|..|.::...:..:||||||.|:.. 
Yeast  1002 DPNGKSNNAHWSDNRMRLTKTFKKNNFKGNARGHSIASSFVTLKELFKKIPANVGFNIECKFPM- 1065

  Fly   512 LEDGKMEEEFEHVVDRNLYIDCILDVILRKAGNRRIVLSCFDPDICTILRFKQNRYPVMFLTLGR 576
            |::.:.||..:.:::.|.::|.:|.|:...|..|.|:.|.|.||||.:|..||...|::|||.|.
Yeast  1066 LDEAEEEELGQIMMEMNHWVDTVLKVVFDNANGRDIIFSSFHPDICIMLSLKQPVIPILFLTEGG 1130

  Fly   577 TTKYQKYMDPRGNSMELAVWHAVAMEFLGVVAHTEDLLRDPSQVNLAKERGLVLFCWGDDNNSKD 641
            :   ::..|.|.:|::..:..|.....||:|:....:|:.|..|.:.|..|||...:|.|||..:
Yeast  1131 S---EQMADLRASSLQNGIRFAKKWNLLGIVSAAAPILKAPRLVQVVKSNGLVCVTYGVDNNDPE 1192

  Fly   642 TIKLLKELGLHAIIYDKMDV----LTTKEVK 668
            ...:..|.|:.|:|.|.:..    ||.|..|
Yeast  1193 NASIQIEAGVDAVIVDSVLAIRRGLTKKNEK 1223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2818NP_608804.1 CBM20_Prei4 44..166 CDD:99888
GDPD_GDE5 371..659 CDD:176549 103/351 (29%)
GDE1NP_015215.1 COG5408 1..300 CDD:227695
ANKYR 409..634 CDD:440430
ANK repeat 427..466 CDD:293786
ANK repeat 468..501 CDD:293786
ANK repeat 506..535 CDD:293786
ANK repeat 540..569 CDD:293786
ANK repeat 572..603 CDD:293786
GDPD_YPL110cp_fungi 871..1219 CDD:176548 104/362 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.