DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2818 and GDPD4

DIOPT Version :10

Sequence 1:NP_608804.1 Gene:CG2818 / 33597 FlyBaseID:FBgn0031566 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_177290.3 Gene:GDPD4 / 843475 AraportID:AT1G71340 Length:328 Species:Arabidopsis thaliana


Alignment Length:313 Identity:71/313 - (22%)
Similarity:110/313 - (35%) Gaps:89/313 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 NTITSLKNAAEHGADMVEFDVQLSKDLVPVVYHDFMIYVSLKSKCSLQEHDFLALPMRELSLEQL 456
            ||:.:...|.....|.:|.||..|.|.|....|:..:. .:....|:|..|        ||::|:
plant    88 NTMDAYSFAIRSRVDCIEVDVSRSSDGVLFALHNRDLQ-RIARNSSVQVGD--------LSMKQI 143

  Fly   457 KKLKVYHIAEGLSRETRSFHNDDCLEHQPFPQLCDVLD---------ALDVHVGFNIEIKWSQRL 512
            |:|.|..|.:|....:|            .|.|.:.|.         .||..||       ....
plant   144 KELDVSEIVKGTLGSSR------------IPTLEEALALISNSVRKVILDAKVG-------PPMY 189

  Fly   513 EDGKMEEEFEHVVDRNLYIDCILDVILRKAGNRRIVLSCFDPDICTILRFKQNRYPVMFLTLGRT 577
            |.|..::              ||.:|.|...|..||.:..|    |:.|....|.|      ...
plant   190 EKGLAQD--------------ILSIIERAQCNNCIVWAKSD----TLARDIIRRAP------DTM 230

  Fly   578 TKYQKYMDP---RGNSMELAVWHAVAMEFLGVVAHTEDLLRDPSQVNLAKERGLVLFCWGDDNNS 639
            ..|...:||   ..||:       :.|:...||.....|: |...|.:.:.|...::.|..|:  
plant   231 VGYIVMVDPLTGARNSL-------LRMKGARVVGVYHPLI-DEELVRVVRRRNKEVYAWTVDD-- 285

  Fly   640 KDTIKLLKELGLHAIIYDKMDVLTTKEVKQSVFHLQAKDSQKELLKLQALEMG 692
            .|.:|.:..||:.|::        |.:  .|:|....:|     |:.:.||.|
plant   286 ADPMKRMLHLGVDAVV--------TSD--PSMFQGLMED-----LRTECLEEG 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2818NP_608804.1 CBM20_Prei4 44..166 CDD:99888
GDPD_GDE5 371..659 CDD:176549 63/278 (23%)
GDPD4NP_177290.3 UgpQ 73..313 CDD:440349 66/296 (22%)
Blue background indicates that the domain is not in the aligned region.

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