DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2818 and SVL2

DIOPT Version :10

Sequence 1:NP_608804.1 Gene:CG2818 / 33597 FlyBaseID:FBgn0031566 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_001185333.1 Gene:SVL2 / 843015 AraportID:AT1G66970 Length:785 Species:Arabidopsis thaliana


Alignment Length:295 Identity:60/295 - (20%)
Similarity:98/295 - (33%) Gaps:106/295 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 CGPTDLVIFHLTVGDFENTAYLIDLYSYSSRVAKEDGPPNHLGYHYV--LPNLFKRSEGNL-ELP 325
            ||   :|:.||       .|..||....:||....:|....   |::  ...||.|.:.|| :.|
plant    21 CG---VVLIHL-------FAAQIDAQRSTSRWQTLNGESCS---HFISFFCALFPRKQENLCDAP 72

  Fly   326 ITCAKGHRPLGMMRLGYLIVKPSSLCALMDMSVSYARYWNSKWTGLDVGHRGSGTSFKAKDAVIR 390
            :..|:|         |:..:.|.|..|...::                                 
plant    73 LVIARG---------GFSGLYPDSSIAAYQLA--------------------------------- 95

  Fly   391 ENTITSLKNAAEHGADMVEF-DVQLSKDLVPVVYHDFMIYVSLKSKCSLQEHDFLALPMRELSLE 454
              |:||:       ||:|.: |:||:||.:.:.:.|    ::|.:..::..    ..|.||.|..
plant    96 --TLTSV-------ADVVLWCDLQLTKDGLGICFPD----LNLANASTIDR----VYPNREKSYS 143

  Fly   455 --------------QLKKLKVYHIAEGLSRETRSFHNDDCLEHQPFPQLCDVLDALDVHVGFNIE 505
                          .|.:|:.:.:..|:...|..|..:..|          :....||....|.|
plant   144 VNGVTTKGWFPNDFSLTELQNFLLIRGILSRTDRFDGNGYL----------ISTIEDVVTTLNRE 198

  Fly   506 IKWSQRLEDGKMEEE------FEHVVDRNLYIDCI 534
            ..|.....|...|::      |...|.|.:.||.|
plant   199 GFWLNVQHDAFYEQQNLSMSSFLLSVSRTVSIDFI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2818NP_608804.1 CBM20_Prei4 44..166 CDD:99888
GDPD_GDE5 371..659 CDD:176549 36/185 (19%)
SVL2NP_001185333.1 GDPD_SHV3_repeat_1 72..371 CDD:176545 43/231 (19%)
GDPD_SHV3_repeat_2 388..689 CDD:176546
Blue background indicates that the domain is not in the aligned region.

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