DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2818 and GDPD3

DIOPT Version :10

Sequence 1:NP_608804.1 Gene:CG2818 / 33597 FlyBaseID:FBgn0031566 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_199144.3 Gene:GDPD3 / 834348 AraportID:AT5G43300 Length:370 Species:Arabidopsis thaliana


Alignment Length:337 Identity:96/337 - (28%)
Similarity:160/337 - (47%) Gaps:54/337 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 VGHRGSGTSF----KAKDAVIRENTITSLKNAAEHGADMVEFDVQLSKDLVPVVYHDFMIY---- 429
            :||||.|.:.    ..|...|:||::.|...||:...|.:|||||:::|..||::||..::    
plant    38 MGHRGFGMNMLQSPDEKMKFIKENSLLSFNVAADFPIDFIEFDVQVTRDGCPVIFHDIFMFTQEQ 102

  Fly   430 --VSLKSKCSLQEHDFLAL-PMRE-LSLEQL-KKLKVYHIAEGLSRETRSFHNDDCLEHQPFPQL 489
              :..|....:..|:||:. |.|: .:::.: :|.|...|.|.      ....||        .|
plant   103 GVIIEKRVTEMDLHEFLSYGPQRDGTNVKPMWRKTKDGRIFEW------KVEKDD--------PL 153

  Fly   490 CDVLDA-LDV--HVGFNIEIKWSQRLEDGKMEEEFEHVVDRNLYIDCILDVILRKAGNRRIVLSC 551
            |.:.|| |:|  .:|||||:|:......|  |.|....:|.      ||.|:...:.||.|:.|.
plant   154 CTLEDAFLNVKHSLGFNIELKFDDNTVYG--EGELRQTLDN------ILTVVNEHSKNRPIIFSS 210

  Fly   552 FDPDICTILRFKQNRYPVMFLTLGRTTKYQKYMDPRGNSMELAVWHAVAMEFLGVVAHTEDLLRD 616
            |.||...::|..|..|||.|||.|..   :.|.|.|.||::.|:.........|:|:..:.:||.
plant   211 FHPDAARLIRNMQRCYPVFFLTNGGC---EIYKDVRRNSLDEAIKLCKESGLQGLVSEVKAILRT 272

  Fly   617 PSQVNLAKERGLVLFCWGDDNNSKDTIKLLKELGLHAIIYDKMDVLTTKEVKQSVFHL------- 674
            |:.:...|:..|.|..:|..||..:.|.|...:|:..:|.|.:     |::.:::.::       
plant   273 PNAITRVKDSKLSLLSYGQLNNVVEVIYLQYLMGVEGVIVDMV-----KDISEAIANIEVTNEDD 332

  Fly   675 -QAKDSQKELLK 685
             :.:|.:|.|::
plant   333 CEGEDERKCLIR 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2818NP_608804.1 CBM20_Prei4 44..166 CDD:99888
GDPD_GDE5 371..659 CDD:176549 92/301 (31%)
GDPD3NP_199144.3 PI-PLCc_GDPD_SF 36..315 CDD:472694 92/301 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.