DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2818 and gdpd3b

DIOPT Version :10

Sequence 1:NP_608804.1 Gene:CG2818 / 33597 FlyBaseID:FBgn0031566 Length:707 Species:Drosophila melanogaster
Sequence 2:XP_017213986.2 Gene:gdpd3b / 567286 ZFINID:ZDB-GENE-121210-2 Length:320 Species:Danio rerio


Alignment Length:99 Identity:30/99 - (30%)
Similarity:41/99 - (41%) Gaps:11/99 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 VGHR-GSGTSFKAKDAVIRENTITSLKNAAEHGADMVEFDVQLSKDLVPVVYHDFMIYVSLKSKC 436
            :.|| |||...        |||:.:..:|...|.||:|.|..|:.|...||.||..:........
Zfish    44 ISHRGGSGERI--------ENTMEAFTHAVSAGTDMLEMDCHLTLDGYVVVSHDNNLLRQTGDDK 100

  Fly   437 SLQEHDFLALPMRELSLEQLKKLKVYHIAEGLSR 470
            ::....|..||:.|..||  ....|.|.:.|..|
Zfish   101 TVSSLKFQDLPLYEEKLE--VTFYVGHYSTGKDR 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2818NP_608804.1 CBM20_Prei4 44..166 CDD:99888
GDPD_GDE5 371..659 CDD:176549 30/99 (30%)
gdpd3bXP_017213986.2 GDPD_GDE4 17..312 CDD:176553 30/99 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.