DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2818 and gdpd3a

DIOPT Version :10

Sequence 1:NP_608804.1 Gene:CG2818 / 33597 FlyBaseID:FBgn0031566 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_998366.1 Gene:gdpd3a / 406482 ZFINID:ZDB-GENE-040426-2279 Length:315 Species:Danio rerio


Alignment Length:136 Identity:37/136 - (27%)
Similarity:54/136 - (39%) Gaps:26/136 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 VGHR-GSGTSFKAKDAVIRENTITSLKNAAEHGADMVEFDVQLSKDLVPVVYHDFMIYVSLKSKC 436
            :.|| |||...        ||||.:..:|.|.|.:|:|.|..|:||...:|.||..:........
Zfish    42 ISHRGGSGERI--------ENTIEAFTHAVEVGTEMLELDCHLTKDGFVMVSHDENLLRQTGQDV 98

  Fly   437 SLQEHDFLALPMRELSLEQLKKLKVYHIAEGLSRETRSFHNDDCLEHQPFPQLCDVLDALDVHVG 501
            |:...:...||..:.:||  ...|..|.:.|..|:.....:    ..:.||           |..
Zfish    99 SISSLNLEDLPPYKETLE--VTFKTGHFSTGSDRKLALLED----VFRKFP-----------HTA 146

  Fly   502 FNIEIK 507
            .|||:|
Zfish   147 VNIEVK 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2818NP_608804.1 CBM20_Prei4 44..166 CDD:99888
GDPD_GDE5 371..659 CDD:176549 37/136 (27%)
gdpd3aNP_998366.1 GDPD_GDE4 13..310 CDD:176553 37/136 (27%)
Blue background indicates that the domain is not in the aligned region.

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