DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2818 and Gdpd1

DIOPT Version :10

Sequence 1:NP_608804.1 Gene:CG2818 / 33597 FlyBaseID:FBgn0031566 Length:707 Species:Drosophila melanogaster
Sequence 2:XP_038941976.1 Gene:Gdpd1 / 303407 RGDID:1311813 Length:323 Species:Rattus norvegicus


Alignment Length:372 Identity:81/372 - (21%)
Similarity:131/372 - (35%) Gaps:107/372 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 GYLIVKPSSLCALMDMSVSYARYWNSKWTGLDVGHR-GSGTSFKAKDAVIRENTITSLKNAAEHG 404
            |||:   :|...|...::.:.|. ..::....:.|| |:|.:.        |||:.:.::|...|
  Rat    15 GYLV---TSFLLLKYPALLHQRK-KQRFLSRHISHRGGAGENL--------ENTMAAFQHAVTIG 67

  Fly   405 ADMVEFDVQLSKDLVPVVYHDFMIYVSLKSKCSLQEHDFLALPMRELSLEQLKKLKVYHIAEGLS 469
            .||:|.|..::||...||.||..:..|.....::.:..:..||      ..|.||.| ....| |
  Rat    68 TDMLELDCHITKDEQVVVSHDANLKRSTGVNVNVSDLKYCELP------PYLCKLDV-PFQRG-S 124

  Fly   470 RETRSFHNDDCL-EHQPFPQLCDVLDALDVHVGFNIEIKWSQRLEDGKMEEEFEHVVDRNLYIDC 533
            ..||:.....|. .....|.|.:|.:|.. ....||:||                 |:.|:.|..
  Rat   125 SGTRTITACKCEGTDTRIPLLKEVFEAFP-ETPINIDIK-----------------VNNNVLIQK 171

  Fly   534 ILDVI-------LRKAGN--RRIVLSCFDPDICTILRFKQNR-YPVMF------LTLGR-TTKYQ 581
            :.:::       |...||  ..||..|          :|:|. .|::|      |.||. .|...
  Rat   172 VSELVKQYKREHLTVWGNASSEIVDKC----------YKENSDIPILFSLQRVLLILGLFFTGLL 226

  Fly   582 KYMDPRGNSMELAVWHAVAMEFLGVVAHTEDLLRDPSQVNLAKE-----RGLVLFCWGDDNNSKD 641
            .::..|....|:.:                     ||.:...||     :|.....|     ..|
  Rat   227 PFVPIREQFFEIPM---------------------PSIILKLKEPHIISKGHKFLIW-----LSD 265

  Fly   642 TIKLLKELGLHAIIYDKMDVLTTKEVKQSVFHLQAKDSQKELLKLQA 688
            |:.:.|.|         .|.||.:.::..::.|..:...|....|.|
  Rat   266 TLLMRKAL---------FDHLTARGIQVYIWVLNEEHEYKRAFDLGA 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2818NP_608804.1 CBM20_Prei4 44..166 CDD:99888
GDPD_GDE5 371..659 CDD:176549 68/311 (22%)
Gdpd1XP_038941976.1 GDPD_GDE4 14..320 CDD:176553 81/372 (22%)
Blue background indicates that the domain is not in the aligned region.

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