DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3604 and col28a1a

DIOPT Version :10

Sequence 1:NP_608801.1 Gene:CG3604 / 33593 FlyBaseID:FBgn0031562 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001334976.1 Gene:col28a1a / 555428 ZFINID:ZDB-GENE-070705-84 Length:1170 Species:Danio rerio


Alignment Length:78 Identity:25/78 - (32%)
Similarity:39/78 - (50%) Gaps:4/78 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VEKAEEP--AVAKPLPDASELTVPEDCHQPKETGRCFALFYRYAYNVDTQSCEEFVYGGCAGNKN 93
            |:::..|  .:..|.||.|...|  .|.|..:.|.|......:.|:....:|.:|.||||.||.|
Zfish  1093 VQESSPPPKTLQPPHPDNSLKHV--GCGQGLDPGPCREYSVMWYYDPQANACAQFWYGGCQGNSN 1155

  Fly    94 NFESKEQCEQACL 106
            .||:::.|:..|:
Zfish  1156 RFETEDICKSTCV 1168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3604NP_608801.1 Kunitz-type 55..105 CDD:438633 17/49 (35%)
col28a1aNP_001334976.1 vWFA_subfamily_ECM 49..214 CDD:238727
gly_rich_SclB <246..>551 CDD:468478
gly_rich_SclB <482..>766 CDD:468478
VWA 802..980 CDD:459670
Kunitz_collagen_alpha1_XXVIII 1117..1167 CDD:438671 17/49 (35%)
Blue background indicates that the domain is not in the aligned region.

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