DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3604 and paplnb

DIOPT Version :9

Sequence 1:NP_001285595.1 Gene:CG3604 / 33593 FlyBaseID:FBgn0031562 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001018400.1 Gene:paplnb / 553586 ZFINID:ZDB-GENE-030131-6023 Length:548 Species:Danio rerio


Alignment Length:77 Identity:26/77 - (33%)
Similarity:41/77 - (53%) Gaps:8/77 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PDASELTVPEDCHQPKETGRCFALFYRYAYNVDTQSCEEFVYGGCAGNKNNFESKEQCEQACLVK 108
            |.||.      |...::.|.|:....|:.::..:.||.:|.:|||.||.|||.||..||:.|  |
Zfish   466 PSASV------CSLARDVGPCYEYKSRFYFDHSSGSCSQFWFGGCQGNGNNFVSKVACERTC--K 522

  Fly   109 SAVSSTDSTTEQ 120
            ::|...:.|:.:
Zfish   523 ASVRGREPTSRR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3604NP_001285595.1 KU 53..106 CDD:238057 19/52 (37%)
paplnbNP_001018400.1 TSP1 28..78 CDD:214559
TSP1 249..300 CDD:214559
TSP1 309..359 CDD:214559
Kunitz_BPTI 470..522 CDD:278443 20/59 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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