DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3604 and APLP2

DIOPT Version :9

Sequence 1:NP_001285595.1 Gene:CG3604 / 33593 FlyBaseID:FBgn0031562 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001633.1 Gene:APLP2 / 334 HGNCID:598 Length:763 Species:Homo sapiens


Alignment Length:100 Identity:36/100 - (36%)
Similarity:51/100 - (51%) Gaps:6/100 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EKAEEPAVAKPLPDASELT--VPEDCHQPKETGRCFALFYRYAYNVDTQSCEEFVYGGCAGNKNN 94
            |...||.....:.| .|:|  |...|.|...||.|.|:..|:.:::....|..|:||||.||:||
Human   286 ENPTEPGSDGTMSD-KEITHDVKAVCSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNN 349

  Fly    95 FESKEQCEQACLVKSAVSSTDSTTEQNSEVATETS 129
            |||::.|...|  |:.:..|...| .:.:|..|||
Human   350 FESEDYCMAVC--KAMIPPTPLPT-NDVDVYFETS 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3604NP_001285595.1 KU 53..106 CDD:238057 21/52 (40%)
APLP2NP_001633.1 A4_EXTRA 42..204 CDD:128326
GFLD subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01217 46..139
APP_N 49..147 CDD:280358
CuBD subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01217 147..205
APP_Cu_bd 149..204 CDD:289676
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..299 3/12 (25%)
Kunitz_BPTI 309..361 CDD:278443 22/53 (42%)
APP_E2 365..547 CDD:289677 5/17 (29%)
APP_amyloid 709..759 CDD:287486
Interaction with DAB2. /evidence=ECO:0000250 749..763
NPXY motif 750..755
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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