DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16713 and Aplp1

DIOPT Version :9

Sequence 1:NP_608799.1 Gene:CG16713 / 33591 FlyBaseID:FBgn0031560 Length:82 Species:Drosophila melanogaster
Sequence 2:NP_031493.2 Gene:Aplp1 / 11803 MGIID:88046 Length:654 Species:Mus musculus


Alignment Length:18 Identity:6/18 - (33%)
Similarity:8/18 - (44%) Gaps:0/18 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LALKNAICGLPHSLNGDG 35
            ||:.|...|.|.:....|
Mouse    35 LAVGNLAVGSPSAAEAPG 52

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16713NP_608799.1 KU 23..81 CDD:238057 3/13 (23%)
Aplp1NP_031493.2 A4_EXTRA 46..211 CDD:128326 1/7 (14%)
GFLD subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01217 50..146 1/3 (33%)
APP_N 55..154 CDD:280358
CuBD subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01217 154..212
APP_Cu_bd 156..211 CDD:289676
Copper-binding 158..178
Zinc-binding. /evidence=ECO:0000250 204..211
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..297
APP_E2 289..471 CDD:289677
Heparin-binding. /evidence=ECO:0000250 314..346
Heparin-binding. /evidence=ECO:0000250 414..445
Collagen-binding. /evidence=ECO:0000250 446..463
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 497..580
Basolateral sorting signal. /evidence=ECO:0000250 608..619
APP_amyloid <612..651 CDD:287486
Interaction with DAB1 636..652
Interaction with DAB2. /evidence=ECO:0000269|PubMed:11247302 640..654
NPXY motif, contains endocytosis signal 644..647
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.