DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16713 and CG42828

DIOPT Version :9

Sequence 1:NP_608799.1 Gene:CG16713 / 33591 FlyBaseID:FBgn0031560 Length:82 Species:Drosophila melanogaster
Sequence 2:NP_001189271.1 Gene:CG42828 / 10178934 FlyBaseID:FBgn0262010 Length:89 Species:Drosophila melanogaster


Alignment Length:84 Identity:29/84 - (34%)
Similarity:42/84 - (50%) Gaps:10/84 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKL----LILVFVFVAFVANALALKNAICGLPHSLNGDGRISCEAYIPSWSYDADRNECVKFIYG 61
            |||    |.|:.|.::.|.:| ..:.|.|.||:...     .|..:...|::.....|||.|::.
  Fly     1 MKLLTQFLCLLAVLLSTVESA-EKRKAFCYLPYEFG-----KCGGHRIMWAFSNKEQECVPFVFS 59

  Fly    62 GCGGNNNRFNSREICEDKC 80
            .||||.|||.::|.||..|
  Fly    60 NCGGNENRFYTKENCEKAC 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16713NP_608799.1 KU 23..81 CDD:238057 21/58 (36%)
CG42828NP_001189271.1 KU 27..78 CDD:197529 19/55 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 43 1.000 Inparanoid score I4148
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000145
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.860

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