DRSC/TRiP Functional Genomics Resources

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Protein Alignment odd and IDD1

DIOPT Version :9

Sequence 1:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_201474.1 Gene:IDD1 / 836806 AraportID:AT5G66730 Length:500 Species:Arabidopsis thaliana


Alignment Length:233 Identity:54/233 - (23%)
Similarity:88/233 - (37%) Gaps:68/233 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 QFICKYCNRQFTKSYNLLIHERTH----------TDE---RPYSCDICG-------KAFRRQDHL 263
            :|:|:.||:.|.:..||.:|.|.|          |.|   :.|.|.:.|       :|......:
plant    60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGI 124

  Fly   264 RDHRYIHSKDKPFKCSDCGKGFC-QSRTLAVHKVTHLEEGPHKCPICQRSFNQR----------- 316
            :.|......:|.:||..|.|.:. ||...|..|:...:|  :||. |...|::|           
plant   125 KKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKE--YKCD-CGTLFSRRDSFITHRAFCD 186

  Fly   317 ----ANLKSHLQS---HSEQSTKE--VVVTTSPATSHSVPNQALSSPQPENLA------------ 360
                .:.|:|.||   :.|..|::  .:...|||...|.|:...|||....:|            
plant   187 ALAEESAKNHTQSKKLYPETVTRKNPEIEQKSPAAVESSPSLPPSSPPSVAIAPAPAISVETESV 251

  Fly   361 -----QHLPVLDLSSSSSSSEKPK-------RMLGFTI 386
                 ..||:.:...|..::..|:       |.:||.:
plant   252 KIISSSVLPIQNSPESQENNNHPEVIIEEASRTIGFNV 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oddNP_722922.1 COG5048 <203..334 CDD:227381 38/155 (25%)
C2H2 Zn finger 222..242 CDD:275368 8/19 (42%)
zf-H2C2_2 234..259 CDD:290200 11/44 (25%)
C2H2 Zn finger 250..270 CDD:275368 4/26 (15%)
zf-H2C2_2 262..285 CDD:290200 6/22 (27%)
C2H2 Zn finger 278..298 CDD:275368 7/20 (35%)
zf-C2H2 304..326 CDD:278523 9/39 (23%)
C2H2 Zn finger 306..326 CDD:275368 8/37 (22%)
IDD1NP_201474.1 C2H2 Zn finger 63..83 CDD:275368 8/19 (42%)
C2H2 Zn finger 104..132 CDD:275368 4/27 (15%)
C2H2 Zn finger 139..158 CDD:275368 6/18 (33%)
C2H2 Zn finger 166..182 CDD:275368 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 44 1.000 Inparanoid score I2683
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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