DRSC/TRiP Functional Genomics Resources

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Protein Alignment odd and AT3G45260

DIOPT Version :9

Sequence 1:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001327332.1 Gene:AT3G45260 / 823664 AraportID:AT3G45260 Length:446 Species:Arabidopsis thaliana


Alignment Length:298 Identity:70/298 - (23%)
Similarity:111/298 - (37%) Gaps:97/298 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 PHHHHHHGHPHH--------PHPHPHHVRPYPAGLHSLHAAVMGRHFGAMPTLKLGGAGGASGVP 207
            |..||....|.:        |:|:|:   |.|.   |.::|...|:   :|    |.....:.|.
plant     4 PDDHHPLSFPSYVLHQEHIAPNPNPN---PNPT---SSNSAKRKRN---LP----GNPDPDAEVI 55

  Fly   208 SGATGSSRPKKQFICKYCNRQFTKSYNLLIHERTH--------------TDERPYSC-------- 250
            :.:..|.....:|||:.||:.|.:..||.:|.|.|              ..::.|.|        
plant    56 ALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHH 120

  Fly   251 -------DICG--KAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFCQSRTLAVH-KVTHLEEGPHK 305
                   |:.|  |.|.|:         |. :|.:||..|.|.:........| |:...:|  ::
plant   121 DPARALGDLTGIKKHFSRK---------HG-EKKWKCDKCSKKYAVMSDWKAHSKICGTKE--YR 173

  Fly   306 CPICQRSFNQRANLKSH---LQSHSEQSTKEVVVTTSPA---------TSHSVPNQ--------A 350
            |. |...|:::.:..:|   ..:.:|:|.:.|.|..:||         .:|...||        .
plant   174 CD-CGTLFSRKDSFITHRAFCDALAEESARFVSVPPAPAYLNNALDVEVNHGNINQNHQQRQLNT 237

  Fly   351 LSS--PQP------ENLA---QHLPVLDLSSSSSSSEK 377
            .||  .||      .|:|   |.||....:||||.|.:
plant   238 TSSQLDQPGFNTNRNNIAFLGQTLPTNVFASSSSPSPR 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oddNP_722922.1 COG5048 <203..334 CDD:227381 35/165 (21%)
C2H2 Zn finger 222..242 CDD:275368 8/19 (42%)
zf-H2C2_2 234..259 CDD:290200 11/55 (20%)
C2H2 Zn finger 250..270 CDD:275368 6/36 (17%)
zf-H2C2_2 262..285 CDD:290200 6/22 (27%)
C2H2 Zn finger 278..298 CDD:275368 5/20 (25%)
zf-C2H2 304..326 CDD:278523 4/24 (17%)
C2H2 Zn finger 306..326 CDD:275368 4/22 (18%)
AT3G45260NP_001327332.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 44 1.000 Inparanoid score I2683
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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