DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment odd and IDD5

DIOPT Version :9

Sequence 1:	NP_722922.1	Gene:	odd / 33583	FlyBaseID:	FBgn0002985	Length:	392	Species:	Drosophila melanogaster
Sequence 2:	NP_001324413.1	Gene:	IDD5 / 814738	AraportID:	AT2G02070	Length:	602	Species:	Arabidopsis thaliana

Alignment Length:	309	Identity:	75/309 - (24%)
Similarity:	106/309 - (34%)	Gaps:	105/309 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly   138 AAIYQQQQQQQQH--PHHHHHHGHPHH-----PHPHPHHVRPYPAGLHSLHAAVMGRHFGAMPTL 195
            |:.:..:|..|.|  |        |:.     |.|.|||..|.|.             ..|.|..
plant     9 ASFFGVRQDDQSHLLP--------PNSSAAAPPPPPPHHQAPLPP-------------LEAPPQK 52

  Fly   196 KLGGAGGASGVPSGATGSSRPK-----KQFICKYCNRQFTKSYNLLIHERTH----------TDE 245
            |...........:.....| ||     .:|||:.||:.|.:..||.:|.|.|          |.|
plant    53 KKRNQPRTPNSDAEVIALS-PKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKE 116

  Fly   246 ---RPYSC---------------DICGKAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFC-QSRTL 291
               :.|.|               |:.|        ::.|.|....:|.:||..|.|.:. ||...
plant   117 VKRKVYLCPEPSCVHHDPSRALGDLTG--------IKKHYYRKHGEKKWKCDKCSKRYAVQSDWK 173

  Fly   292 AVHKVTHLEEGPHKCPICQRSFNQRANLKSH---LQSHSEQSTKEVVVTTSPATSHSVP------ 347
            |..|....:|  ::|. |...|::|.:..:|   ..:.:::|.:.....|| ..||..|
plant   174 AHSKTCGTKE--YRCD-CGTLFSRRDSFITHRAFCDALAQESARHPTSLTS-LPSHHFPYGQNTN 234

  Fly   348 ---NQALS-------SPQPENLAQHLP--VLDLSS--------SSSSSE 376
               |.|.|       ...|:|| .|.|  ||.|.|        |.|||:
plant   235 NSNNNASSMILGLSHMGAPQNL-DHQPGDVLRLGSGGGGGGAASRSSSD 282

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
odd	NP_722922.1	COG5048	<203..334	CDD:227381	38/167 (23%)
		C2H2 Zn finger	222..242	CDD:275368	8/19 (42%)
		zf-H2C2_2	234..259	CDD:290200	11/52 (21%)
		C2H2 Zn finger	250..270	CDD:275368	5/34 (15%)
		zf-H2C2_2	262..285	CDD:290200	7/22 (32%)
		C2H2 Zn finger	278..298	CDD:275368	7/20 (35%)
		zf-C2H2	304..326	CDD:278523	5/24 (21%)
		C2H2 Zn finger	306..326	CDD:275368	5/22 (23%)
IDD5	NP_001324413.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	44	1.000	Inparanoid score	I2683
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050