DRSC/TRiP Functional Genomics Resources

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Protein Alignment odd and klf11

DIOPT Version :9

Sequence 1:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_012818552.1 Gene:klf11 / 733909 XenbaseID:XB-GENE-956858 Length:500 Species:Xenopus tropicalis


Alignment Length:406 Identity:91/406 - (22%)
Similarity:137/406 - (33%) Gaps:137/406 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSTSASPISNITVDDEL--NLSREQDFAEEDFIVIKEERETSLSPMLTPPHTPTEEPLRRV--- 60
            |||:||..:|:..|...|  ::.|....|.|   |.|..|..:.|.:   .||....|.||:   
 Frog   124 MSSSSACSVSSSVVYKPLVSSIPRAPSPAVE---VCKPCRAMATSVI---RHTADSSPFRRIPEP 182

  Fly    61 --------------------HPAISEEAVATQ-----LHMRHMAHYQQQQQQQQQQQQHRLWLQM 100
                                |....|||.|.|     ||.....|......:...||....    
 Frog   183 PAQAKAPAPKCTAEKKHKPDHSKPPEEAPAPQNPSHTLHRPQPKHPCTGNTEAGNQQPVAF---- 243

  Fly   101 QQQQQQHQAPQQYPV-YPTASAD------PVAVHQQLMNHWIRNAAIYQQQQQQQQHPHHHHHHG 158
             :..|..:|.|..|: .|.:|:.      ||.....:::.:|:..:                   
 Frog   244 -ENDQPKEANQLLPISVPVSSSPLLCQMIPVTGQAGVISAFIKPPS------------------- 288

  Fly   159 HPHHPHPHPHHVRP-YPAGLHSLHAAVMGRHF--GAMPTL---------------KLGGAGGASG 205
                 .|..:.|:| .|.........:||...  ||:..:               .|...|....
 Frog   289 -----QPISNTVKPILPQSSPVSQPVLMGAPVSQGALMLVLPQAPIPQSPQQCPQTLVAVGNTKL 348

  Fly   206 VPSG------ATGSSRP-------KKQFICKY--CNRQFTKSYNLLIHERTHTDERPYSC--DIC 253
            :|..      |:|.|.|       ::.::|.:  |.:.:.||.:|..|.||||.|:|:||  :.|
 Frog   349 LPLAPAPVFIASGQSSPPQMDFSRRRNYVCNFSGCRKTYFKSSHLKAHLRTHTGEKPFSCNWEGC 413

  Fly   254 GKAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFCQSRTLAVHKVTHLEEGPHKCPICQRSFNQRAN 318
            .|.|.|.|.|..||..|:.:|.|                            .||:|.|.|.:..:
 Frog   414 DKKFARSDELSRHRRTHTGEKKF----------------------------ACPVCDRRFMRSDH 450

  Fly   319 LKSHLQSHSEQSTKEV 334
            |..|.:.|  .:||:|
 Frog   451 LTKHARRH--MTTKKV 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oddNP_722922.1 COG5048 <203..334 CDD:227381 40/147 (27%)
C2H2 Zn finger 222..242 CDD:275368 7/21 (33%)
zf-H2C2_2 234..259 CDD:290200 13/26 (50%)
C2H2 Zn finger 250..270 CDD:275368 9/21 (43%)
zf-H2C2_2 262..285 CDD:290200 6/22 (27%)
C2H2 Zn finger 278..298 CDD:275368 0/19 (0%)
zf-C2H2 304..326 CDD:278523 7/21 (33%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
klf11XP_012818552.1 PHA03247 <95..366 CDD:223021 54/276 (20%)
COG5048 360..>431 CDD:227381 25/70 (36%)
C2H2 Zn finger 381..400 CDD:275368 6/18 (33%)
C2H2 Zn finger 408..430 CDD:275368 9/21 (43%)
zf-H2C2_2 422..445 CDD:372612 10/50 (20%)
zf-C2H2 436..458 CDD:333835 8/49 (16%)
C2H2 Zn finger 438..458 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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