DRSC/TRiP Functional Genomics Resources

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Protein Alignment odd and si:ch211-117k10.3

DIOPT Version :9

Sequence 1:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_684045.1 Gene:si:ch211-117k10.3 / 556200 ZFINID:ZDB-GENE-141212-273 Length:371 Species:Danio rerio


Alignment Length:350 Identity:80/350 - (22%)
Similarity:116/350 - (33%) Gaps:128/350 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSTSASPISNITVDDELNLSREQDFAEEDFIVIKEERETSLSP--------MLTPPHTPTEEPL 57
            :|||.:..:.:|                |:|::.|.|....|||        ...||.:|.|   
Zfish    93 LSSTFSPTLEDI----------------EEFLMEKMELHAPLSPEEKSKEDDATVPPSSPGE--- 138

  Fly    58 RRVHPAISEEAVATQLHMRHMAHYQQQQQQQQQQQQHRLW------LQMQQQQQQHQAPQQ---- 112
                   |||..:.      ||..|..|..........:.      ||:|..|..|..||.    
Zfish   139 -------SEEKSSM------MATSQTTQSVNATASATSVLVGAPFVLQLQPLQLSHALPQPDNQS 190

  Fly   113 ------------------------YPVYPTASADPVAVHQQLMNHWIRNAAIYQQQQQQQQHPHH 153
                                    .|..|:|:..|           |...|:.|.|:..:     
Zfish   191 GVAGGLRVAHLVLGVQGTQNITLLSPQVPSATLLP-----------IMGEAVNQDQKYVK----- 239

  Fly   154 HHHHGHPHHPHPHPHHVRPYPAGLHSLHAAVMGRHFGAMPTLKLGGAGGASGV-PSGATGSSRPK 217
                            :.|.|.               |:..:.:.|||....: |..:..::...
Zfish   240 ----------------IAPLPI---------------AVRAVGIAGAGLVKAITPRPSRSTTETL 273

  Fly   218 KQFICKY--CNRQFTKSYNLLIHERTHTDERPYSCD--ICGKAFRRQDHLRDHRYIHSKDKPFKC 278
            :...|.:  |.:.:|||.:|..|.|.||.|:||.|.  .||..|.|.|.|..||..||..||::|
Zfish   274 RVHKCSHPGCEKMYTKSSHLKAHFRRHTGEKPYLCSWPDCGWRFSRSDELSRHRRSHSGVKPYEC 338

  Fly   279 SDCGKGFCQSRTLAVHKVTHLEEGP 303
            :.|.|.|.:|..|:.|  |.:..||
Zfish   339 TMCDKKFARSDHLSKH--TKVHRGP 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oddNP_722922.1 COG5048 <203..334 CDD:227381 36/105 (34%)
C2H2 Zn finger 222..242 CDD:275368 8/21 (38%)
zf-H2C2_2 234..259 CDD:290200 12/26 (46%)
C2H2 Zn finger 250..270 CDD:275368 9/21 (43%)
zf-H2C2_2 262..285 CDD:290200 10/22 (45%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
zf-C2H2 304..326 CDD:278523 79/349 (23%)
C2H2 Zn finger 306..326 CDD:275368
si:ch211-117k10.3XP_684045.1 zf-C2H2 276..300 CDD:278523 8/23 (35%)
zf-C2H2_8 278..357 CDD:292531 34/80 (43%)
C2H2 Zn finger 278..300 CDD:275368 8/21 (38%)
zf-H2C2_2 292..319 CDD:290200 12/26 (46%)
C2H2 Zn finger 308..330 CDD:275368 9/21 (43%)
zf-H2C2_2 322..347 CDD:290200 11/24 (46%)
C2H2 Zn finger 338..358 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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