DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment odd and btd

DIOPT Version :9

Sequence 1:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster


Alignment Length:519 Identity:109/519 - (21%)
Similarity:149/519 - (28%) Gaps:241/519 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 VHPAISEEAVATQLHMRHMAHYQQQQ-----QQ---------QQQQQQHRLWLQMQQQQQQHQAP 110
            ::|...:.....|.|.:|..|.||||     ||         ||.||||...|..||||||.|..
  Fly     9 LNPYAQQHQAQQQQHAQHQQHAQQQQHHLHMQQAQHHLHLSHQQAQQQHMQHLTQQQQQQQQQQQ 73

  Fly   111 QQYPVYPTASADPVAVHQQLMNHWIRNAAIYQQQQQQQQHPHHHHHH------------------ 157
            ||                             ||||||||.|....|.                  
  Fly    74 QQ-----------------------------QQQQQQQQQPQQQQHDFLSAAALLSAPPSLSGSS 109

  Fly   158 ------GHPHHPHPHPHHVRPYP----AGLHSLHAAVM----------------GRHFGAM---- 192
                  ..|.:..|......|||    .|..|.::::.                .:.|.::    
  Fly   110 SGSSSGSSPLYGKPPMKLELPYPQASSTGTASPNSSIQSAPSSASVSPSIFPSPAQSFASISASP 174

  Fly   193 --PTLKL-----GGAGGASGVPSGATGSS------------------------------------ 214
              ||..|     ..||..:|.|:.::.||                                    
  Fly   175 STPTTTLAPPTTAAAGALAGSPTSSSPSSSAASAAAAAAAAAAAAADLGAAAVASAAYGWNTAYS 239

  Fly   215 ----------------------------------------------------------------- 214
                                                                             
  Fly   240 GLGPARSQFPYAQYASDYYGNAVGMSSSAAWFSHQERLYQPWSSQSYPGFNFDDIAFQTQLQRRS 304

  Fly   215 -----------------------RPKKQFICKY--CNRQFTKSYNLLIHERTHTDERPYSCDICG 254
                                   |.:||.||..  |.|.:.|:.:|..|.|.||.|||:.|..||
  Fly   305 VRCTCPNCTNEMSGLPPIVGPDERGRKQHICHIPGCERLYGKASHLKTHLRWHTGERPFLCLTCG 369

  Fly   255 KAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFCQSRTLAVHKVTHLEEGPHKCPICQRSFNQRANL 319
            |.|.|.|.|:.|...|:..:|:.|..|.|.|.:|..|:.||.||.::...| .:......::|..
  Fly   370 KRFSRSDELQRHGRTHTNYRPYACPICSKKFSRSDHLSKHKKTHFKDKKSK-KVLAAEAKEQAAA 433

  Fly   320 KSHLQSHSEQSTKEVVVTTSPATSHSVPNQALSSPQPEN--LAQHLPVLDL---SSSSSSSEKP 378
            ...|:...::|.|       |.|    |.......||:.  |..:.|..:|   |:|:.||..|
  Fly   434 AIKLEKKEKKSGK-------PLT----PPVEFKQEQPDTTPLVNYAPYANLYQHSTSAGSSVNP 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oddNP_722922.1 COG5048 <203..334 CDD:227381 46/256 (18%)
C2H2 Zn finger 222..242 CDD:275368 7/21 (33%)
zf-H2C2_2 234..259 CDD:290200 13/24 (54%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
zf-H2C2_2 262..285 CDD:290200 7/22 (32%)
C2H2 Zn finger 278..298 CDD:275368 8/19 (42%)
zf-C2H2 304..326 CDD:278523 3/21 (14%)
C2H2 Zn finger 306..326 CDD:275368 2/19 (11%)
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 6/18 (33%)
zf-H2C2_2 349..374 CDD:290200 13/24 (54%)
C2H2 Zn finger 365..385 CDD:275368 9/19 (47%)
zf-H2C2_2 377..402 CDD:290200 8/24 (33%)
zf-C2H2 391..413 CDD:278523 8/21 (38%)
C2H2 Zn finger 393..413 CDD:275368 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I1951
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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