DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment odd and CG10959

DIOPT Version :9

Sequence 1:	NP_722922.1	Gene:	odd / 33583	FlyBaseID:	FBgn0002985	Length:	392	Species:	Drosophila melanogaster
Sequence 2:	NP_572451.1	Gene:	CG10959 / 31743	FlyBaseID:	FBgn0030010	Length:	443	Species:	Drosophila melanogaster

Alignment Length:	376	Identity:	87/376 - (23%)
Similarity:	145/376 - (38%)	Gaps:	89/376 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 SASPISNITVD--------DELNLSREQDFAEEDFIVIKEE---------------RETSLSPML 46
            ||.|::   ||        :|..||.|:| ||::..:.::|               .|.::..|.
  Fly    90 SAEPLA---VDSFKKEYLPNEDVLSEEED-AEQELGLEQDEGNPLRIMVLGGKQSVDEETIDTMW 150

  Fly    47 TPPHTPTEEPLRRVHPAISEEAVATQLHMRHMAHYQQQQQQQQQQQQHRLWLQMQQQQQQHQAPQ 111
            .|.|   :.....|:...:.||:..       ....|..|..:..::|:...:.|:|.:.:..|.
  Fly   151 QPDH---DSSSASVNEGCALEALLG-------VENPQDYQPDEDGEEHQSVFKKQRQPKDYNCPH 205

  Fly   112 QYPVYPTASADPVAVHQQLMNHWIRNA-------------AIYQQQQQQQQHPHHHHHHGHPHHP 163
            ....|.|         |:.:|..::.:             |.:...:...||....|
  Fly   206 CDRRYTT---------QKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEH-------- 253

  Fly   164 HPHPHHVRPYPAGL--------HSLHAAVMGRHFGAMPTLKLGGAG-GASGVPSGATGSSR---- 215
                   ..:...|        .||...|.| |.||. |.|..... |.|.|......|.|
  Fly   254 -------TEFACQLCDKVFKSSRSLLRHVQG-HSGAR-TFKCEHENCGKSFVNQHNLTSHRRVHS 309

  Fly   216 PKKQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKDKPFKCSD 280
            .::.::|:.|..:......|::|.||||.|:|:.|..|.:.|..:..|.:|:.:||.:||:||..
  Fly   310 EERNYVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDK 374

  Fly   281 CGKGFCQSRTLAVHKVTHLEEGPHKCPICQRSFNQRANLKSHLQSHSEQST 331
            |...|.:.:.|..||..||.....||.||..::.|.|.|.:|:::|..|::
  Fly   375 CDSAFSRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAHKLQAS 425

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
odd	NP_722922.1	COG5048	<203..334	CDD:227381	42/133 (32%)
		C2H2 Zn finger	222..242	CDD:275368	5/19 (26%)
		zf-H2C2_2	234..259	CDD:290200	11/24 (46%)
		C2H2 Zn finger	250..270	CDD:275368	5/19 (26%)
		zf-H2C2_2	262..285	CDD:290200	9/22 (41%)
		C2H2 Zn finger	278..298	CDD:275368	6/19 (32%)
		zf-C2H2	304..326	CDD:278523	8/21 (38%)
		C2H2 Zn finger	306..326	CDD:275368	7/19 (37%)
CG10959	NP_572451.1	C2H2 Zn finger	232..253	CDD:275368	3/20 (15%)
		COG5048	<258..416	CDD:227381	50/159 (31%)
		C2H2 Zn finger	258..278	CDD:275368	5/20 (25%)
		C2H2 Zn finger	289..308	CDD:275368	5/18 (28%)
		C2H2 Zn finger	316..336	CDD:275368	5/19 (26%)
		zf-H2C2_2	328..353	CDD:290200	11/24 (46%)
		C2H2 Zn finger	344..364	CDD:275368	5/19 (26%)
		zf-H2C2_2	357..381	CDD:290200	10/23 (43%)
		C2H2 Zn finger	372..392	CDD:275368	6/19 (32%)
		C2H2 Zn finger	400..420	CDD:275368	7/19 (37%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	54	1.000	Inparanoid score	I1809
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.050