DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment odd and CG32772

DIOPT Version :9

Sequence 1:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001284870.1 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster


Alignment Length:344 Identity:86/344 - (25%)
Similarity:131/344 - (38%) Gaps:131/344 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 QQQQQQQQQQQQHRLWLQMQQQQQQHQAPQQYP-------------VYPTASADPV-----AVHQ 128
            ||||.|..|||||:...|.||||||.|:.....             ::....:.|:     :...
  Fly    80 QQQQHQNPQQQQHQNSQQQQQQQQQMQSSSSSENLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKS 144

  Fly   129 QLMNHWIRNAAIYQQQQQQQQHPHHHHHHGHPHHPHPHPHHVRPYPAGLHSLHAAVMGRHFGAMP 193
            .||.| |||                                           |:|          
  Fly   145 SLMTH-IRN-------------------------------------------HSA---------- 155

  Fly   194 TLKLGGAGGASGVPSGATGSSRPKKQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFR 258
                                   :::|:|.||::.||::.||..|||.||::|||.|..|||.|.
  Fly   156 -----------------------ERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTFT 197

  Fly   259 RQDHLRDHRYIHSKDKPFKCS--DCGKGFCQSRTLAVHKVTHLEEGPHKCPICQRSFNQRANLKS 321
            :..:|.:||.:|:.::||.|:  :||:.|.|...|..|..:|.:...:.|.:|.:.|.|..:|..
  Fly   198 QITNLNNHRRLHTGERPFVCNEPECGRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLNQ 262

  Fly   322 HLQSHS-----------EQSTKEVVVTTSPATSHSVPNQALSSP-----------QPENLAQHLP 364
            |||:|:           |::.|    ..|...:| :....|:.|           |..:|.|||.
  Fly   263 HLQAHAGVTGYYCPRCPEKNFK----LQSQLHTH-MKTHGLAFPYECDKCDEKFLQQAHLDQHLK 322

  Fly   365 V-------LDLSSSSSSSE 376
            :       .|:..||.:.|
  Fly   323 MHDEFKFKCDICPSSFNQE 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oddNP_722922.1 COG5048 <203..334 CDD:227381 46/143 (32%)
C2H2 Zn finger 222..242 CDD:275368 10/19 (53%)
zf-H2C2_2 234..259 CDD:290200 15/24 (63%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
zf-H2C2_2 262..285 CDD:290200 9/24 (38%)
C2H2 Zn finger 278..298 CDD:275368 7/21 (33%)
zf-C2H2 304..326 CDD:278523 8/21 (38%)
C2H2 Zn finger 306..326 CDD:275368 8/19 (42%)
CG32772NP_001284870.1 COG5048 <124..378 CDD:227381 68/300 (23%)
C2H2 Zn finger 133..153 CDD:275368 7/63 (11%)
zf-H2C2_2 145..170 CDD:290200 13/101 (13%)
C2H2 Zn finger 161..181 CDD:275368 10/19 (53%)
zf-H2C2_2 173..198 CDD:290200 15/24 (63%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
C2H2 Zn finger 217..239 CDD:275368 7/21 (33%)
zf-H2C2_2 231..256 CDD:290200 6/24 (25%)
C2H2 Zn finger 247..267 CDD:275368 8/19 (42%)
C2H2 Zn finger 275..296 CDD:275368 4/25 (16%)
C2H2 Zn finger 304..324 CDD:275368 5/19 (26%)
C2H2 Zn finger 331..351 CDD:275368 4/11 (36%)
C2H2 Zn finger 359..380 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 44 1.000 Inparanoid score I2683
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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