DRSC/TRiP Functional Genomics Resources

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Protein Alignment odd and hsr1

DIOPT Version :9

Sequence 1:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_593553.1 Gene:hsr1 / 2543251 PomBaseID:SPAC3H1.11 Length:582 Species:Schizosaccharomyces pombe


Alignment Length:352 Identity:80/352 - (22%)
Similarity:137/352 - (38%) Gaps:70/352 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PHTPTEEPLRRVHPAISEEAVATQLHMRHMAHYQQQQQQQQQQQQHRLWLQMQQQQQQHQAPQQY 113
            |||..:..|.|..|.::.|...|.     :.:|..||...........:..:         ..|.
pombe   244 PHTQYQNNLLRAQPNVNCENFPTT-----VPNYPFQQPSYNPNALVPSYTTL---------VSQL 294

  Fly   114 PVYP--TASADPVAVHQQLMNHW----IRNAA-IYQQQQQQQQHPHHHHHHGHPHHPHPHPHHVR 171
            |..|  |.|:.|::....:.::.    ::::. .|..:|:...:.::.......::..|......
pombe   295 PPSPCLTVSSGPLSTASSIPSNCSCPSVKSSGPSYHAEQEVNVNSYNGGIPSTSYNDTPQQSVTG 359

  Fly   172 PYPAG------LHSLHAAVMGRHFGAMPTLKLGGAGGASG----------------VPSGATGSS 214
            .|.:|      |:..:.:  ||...:|...:..|..|..|                ||....|  
pombe   360 SYNSGETMSTYLNQTNTS--GRSPNSMEATEQIGTIGTDGSMKRRKRRQPSNRKTSVPRSPGG-- 420

  Fly   215 RPKKQFICKYCNRQFTKSYNLLIHERT-HTDERPYSCDICGKAFRRQDHLRDHRYIHSKDKP-FK 277
               |.|:|..|:::|.:|.:|..|.|: ||.|:|:.| ||||.|.|:|:||.|..:|....| ..
pombe   421 ---KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLA 481

  Fly   278 CSDCGKGFCQSRT--LAVHKVTHLEEGPHKCPICQRSFNQRANLKSHLQSHSEQSTKEVVVTTSP 340
            |.....|:..|..  ..|.....:|: .:|.||.|           .:.|...::|..::.:..|
pombe   482 CFFQPSGYYSSGAPGAPVQPQKPIED-LNKIPINQ-----------GMDSSQIENTNLMLSSQRP 534

  Fly   341 ATSHSVPNQAL--SSPQPENLAQHLPV 365
            .:...||..|.  :|.:||.|:: |||
pombe   535 LSQQIVPEIAAYPNSIRPELLSK-LPV 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oddNP_722922.1 COG5048 <203..334 CDD:227381 41/150 (27%)
C2H2 Zn finger 222..242 CDD:275368 7/20 (35%)
zf-H2C2_2 234..259 CDD:290200 13/25 (52%)
C2H2 Zn finger 250..270 CDD:275368 11/19 (58%)
zf-H2C2_2 262..285 CDD:290200 6/23 (26%)
C2H2 Zn finger 278..298 CDD:275368 4/21 (19%)
zf-C2H2 304..326 CDD:278523 4/21 (19%)
C2H2 Zn finger 306..326 CDD:275368 3/19 (16%)
hsr1NP_593553.1 COG5048 103..582 CDD:227381 80/352 (23%)
zf-C2H2 423..444 CDD:278523 7/20 (35%)
C2H2 Zn finger 425..446 CDD:275368 7/20 (35%)
zf-H2C2_2 437..462 CDD:290200 13/25 (52%)
C2H2 Zn finger 454..473 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I1951
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.080

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