DRSC/TRiP Functional Genomics Resources

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Protein Alignment odd and egr2

DIOPT Version :9

Sequence 1:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001093725.1 Gene:egr2 / 100101746 XenbaseID:XB-GENE-853290 Length:429 Species:Xenopus tropicalis


Alignment Length:268 Identity:69/268 - (25%)
Similarity:100/268 - (37%) Gaps:74/268 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 QQQQQQHQAPQQYPVYPTASADPVAVHQQLMN-HWIRNAAIYQQQQQQQQHPHHHHHHG------ 158
            |.|:..|..|.:.| :| ...|.:.|...|.. ..|||..:.....:..:.|..:..|.      
 Frog   214 QCQRDLHSMPDRKP-FP-CPLDSIRVPPPLTPLSTIRNFTLGGSSNEGSRLPSAYSPHNLPLRPI 276

  Fly   159 -----HPHHPHPHPHHVRPYPAGLHSLHAAVMGRHFGAMPTLKLGGAGGASGVPSGATGSSRPKK 218
                 :|:.|...|.|.||||.                          .|.|             
 Frog   277 LRPRKYPNRPSKTPVHERPYPC--------------------------PAEG------------- 302

  Fly   219 QFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKDKPFKCSDCGK 283
                  |:|:|::|..|..|.|.||..:|:.|.||.:.|.|.|||..|...|:.:|||.|..||:
 Frog   303 ------CDRRFSRSDELTRHIRIHTGHKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDYCGR 361

  Fly   284 GFCQSRTLAVHKVTHLEEGPHKCPICQRSFNQRANLKSHLQSHSEQSTKEVVVTTSPA-TSHSVP 347
            .|.:|.....|...||.:            .:|.|  |...:.|..:|:|..::.||| |.:|:.
 Frog   362 KFARSDERKRHTKIHLRQ------------KERKN--SATAAPSGSATQERPLSLSPAGTGNSMC 412

  Fly   348 NQALSSPQ 355
            :...||.|
 Frog   413 STGSSSGQ 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oddNP_722922.1 COG5048 <203..334 CDD:227381 38/130 (29%)
C2H2 Zn finger 222..242 CDD:275368 7/19 (37%)
zf-H2C2_2 234..259 CDD:290200 10/24 (42%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
zf-H2C2_2 262..285 CDD:290200 10/22 (45%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
zf-C2H2 304..326 CDD:278523 3/21 (14%)
C2H2 Zn finger 306..326 CDD:275368 3/19 (16%)
egr2NP_001093725.1 DUF3446 92..161 CDD:371803
zf-C2H2 296..320 CDD:333835 11/68 (16%)
C2H2 Zn finger 298..320 CDD:275368 9/66 (14%)
COG5048 324..>391 CDD:227381 25/80 (31%)
C2H2 Zn finger 328..348 CDD:275368 9/19 (47%)
C2H2 Zn finger 356..376 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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