DRSC/TRiP Functional Genomics Resources

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Protein Alignment odd and osr2

DIOPT Version :10

Sequence 1:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_002934454.1 Gene:osr2 / 100038196 XenbaseID:XB-GENE-481907 Length:312 Species:Xenopus tropicalis


Alignment Length:277 Identity:120/277 - (43%)
Similarity:145/277 - (52%) Gaps:61/277 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 PQQYPVYPT----------------ASADPV-------AVHQQLMNHW---------IRNAAIYQ 142
            |...|::|:                |:.|.:       ||....||||         |..:.|.:
 Frog     7 PAPIPLHPSLQLTNYSFLQAVNTFPAAVDHLQGLYGLSAVQTMHMNHWTLGYPNMHGITRSTITE 71

  Fly   143 QQQQQQQHPHHHHHHGHPHHPHP-HPH-----HVRPYPAGLHS-------LHAAVMGRH-----F 189
            ....|............|...|. ||.     ||.|   .||.       .:.|:....     .
 Frog    72 MAAAQGLMDARFSFPALPFATHLFHPKQGAIAHVIP---ALHKDRPRFDFANLAIAATQEDPPKI 133

  Fly   190 GAMPTLKLGGAGGASGV--------PSGATGSSRPKKQFICKYCNRQFTKSYNLLIHERTHTDER 246
            |.:..|..|.....|.:        ||.....|:.||:||||:|.|.||||||||||||||||||
 Frog   134 GDLSKLSPGLGSPISEISKLSPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDER 198

  Fly   247 PYSCDICGKAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFCQSRTLAVHKVTHLEEGPHKCPICQR 311
            ||:||||.||||||||||||||||||:|||||.:|||||||||||||||..|::|.|||||.|.|
 Frog   199 PYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTCGR 263

  Fly   312 SFNQRANLKSHLQSHSE 328
            :||||:|||:||.:|::
 Frog   264 TFNQRSNLKTHLLTHTD 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oddNP_722922.1 COG5048 <203..334 CDD:227381 93/134 (69%)
C2H2 Zn finger 222..242 CDD:275368 16/19 (84%)
C2H2 Zn finger 250..270 CDD:275368 18/19 (95%)
C2H2 Zn finger 278..298 CDD:275368 16/19 (84%)
C2H2 Zn finger 306..326 CDD:275368 13/19 (68%)
osr2XP_002934454.1 C2H2 Zn finger 174..194 CDD:275368 16/19 (84%)
zf-H2C2_2 186..211 CDD:463886 22/24 (92%)
C2H2 Zn finger 202..222 CDD:275368 18/19 (95%)
zf-H2C2_2 214..237 CDD:463886 19/22 (86%)
C2H2 Zn finger 230..250 CDD:275368 16/19 (84%)
COG5048 251..>312 CDD:227381 18/30 (60%)
C2H2 Zn finger 258..278 CDD:275368 13/19 (68%)
C2H2 Zn finger 286..306 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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