DRSC/TRiP Functional Genomics Resources

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Protein Alignment odd and egr1

DIOPT Version :9

Sequence 1:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001090830.1 Gene:egr1 / 100038164 XenbaseID:XB-GENE-853412 Length:499 Species:Xenopus tropicalis


Alignment Length:356 Identity:81/356 - (22%)
Similarity:119/356 - (33%) Gaps:89/356 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SPMLTPPHTPTEEPLRRV------HPAISEEAVATQLHMRHMAHYQQQQQQQQQQQQHRLWLQMQ 101
            ||.|.|..:|  :|.:..      :|..:.....|...:..:..|...|||.............|
 Frog   184 SPELFPDQSP--QPFQNASTASIPYPPPAYPVSKTTFQVPMIPDYLFPQQQGDVSLVSADQKPFQ 246

  Fly   102 QQQQQHQAPQQYPVYPTASADPVAVHQQLMNHWIRNAAIYQQQQQQQQHPHHHHHHGHPHHPHPH 166
            ..:.:.|.|...|: .|..|......|.|       ..|....|.|...|.....  :|:.|...
 Frog   247 AMESRTQQPSLTPL-STIKAFATQTSQDL-------KTINSTYQSQIIKPSRMRK--YPNRPSKT 301

  Fly   167 PHHVRPYPAGLHSLHAAVMGRHFGAMPTLKLGGAGGASGVPSGATGSSRPKKQFICKYCNRQFTK 231
            |.|.|||...:.|                                             |:|:|::
 Frog   302 PPHERPYACPVES---------------------------------------------CDRRFSR 321

  Fly   232 SYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFCQSRTLAVHKV 296
            |..|..|.|.||.::|:.|.||.:.|.|.|||..|...|:.:|||.|..||:.|.          
 Frog   322 SDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA---------- 376

  Fly   297 THLEEGPHKCPICQRSFNQRANLKSHLQSHSEQSTKEVVVT-TSPATSHSVPNQALSSPQPENLA 360
                          ||..::.:.|.||:...:::.|...|: .||.:|:| |:.:.|.|.|...:
 Frog   377 --------------RSDERKRHTKIHLRQKDKKADKATPVSVASPVSSYS-PSASTSYPSPVPTS 426

  Fly   361 QHLPVLDLSSSSSSSEKPKRMLGFTIDEIMS 391
            ...||.....|...|..|......|...:.|
 Frog   427 YSSPVSSAYPSPVHSSFPSPTTAVTYPSVTS 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
oddNP_722922.1 COG5048 <203..334 CDD:227381 33/130 (25%)
C2H2 Zn finger 222..242 CDD:275368 7/19 (37%)
zf-H2C2_2 234..259 CDD:290200 10/24 (42%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
zf-H2C2_2 262..285 CDD:290200 10/22 (45%)
C2H2 Zn finger 278..298 CDD:275368 4/19 (21%)
zf-C2H2 304..326 CDD:278523 5/21 (24%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
egr1NP_001090830.1 DUF3446 106..180 CDD:288757
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..309 7/22 (32%)
zf-C2H2 308..332 CDD:278523 9/68 (13%)
C2H2 Zn finger 310..332 CDD:275368 8/66 (12%)
zf-H2C2_2 324..349 CDD:290200 10/24 (42%)
C2H2 Zn finger 340..360 CDD:275368 9/19 (47%)
zf-H2C2_2 352..377 CDD:290200 11/48 (23%)
C2H2 Zn finger 368..388 CDD:275368 7/43 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 379..423 12/44 (27%)
DUF3432 401..486 CDD:288743 16/58 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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