DRSC/TRiP Functional Genomics Resources

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Protein Alignment sob and osr1

DIOPT Version :9

Sequence 1:NP_476882.1 Gene:sob / 33581 FlyBaseID:FBgn0004892 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001006079.1 Gene:osr1 / 450059 ZFINID:ZDB-GENE-070321-1 Length:264 Species:Danio rerio


Alignment Length:216 Identity:98/216 - (45%)
Similarity:115/216 - (53%) Gaps:46/216 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 PLPSIGTVSAAVAAA-----AAAAAAAASQQAALDCATAAELAAECDLPLLDGEDALSFEAGDLD 324
            |||||......|..|     ...:.|::..:...|.|..|..|.:.|  .|..|| ||...|.:.
Zfish    80 PLPSIPLFPHLVQPAKQESSGPGSGASSKSKPRFDFANLAAAATQDD--ALKAED-LSTNNGHVR 141

  Fly   325 SSYGSFMFNPSAFSQAETDSALHSLQATMYQDKMSVISGAAGGVGAGAVGGLEEAGSSAAAAAAQ 389
            |.....:.:.:..|..|...:...|.:                                      
Zfish   142 SPSLGCLLDVAKLSSPERKPSRGRLPS-------------------------------------- 168

  Fly   390 RSKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCA 454
            ::||:|:||||.|.||||||||||||||||||||:||||.||||||||||||||||||||||||.
Zfish   169 KTKKEFVCKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 233

  Fly   455 ECGKGFCQSRTLAVHKILHME 475
            ||||||||||||||||.|||:
Zfish   234 ECGKGFCQSRTLAVHKTLHMQ 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sobNP_476882.1 COG5048 <389..529 CDD:227381 75/87 (86%)
C2H2 Zn finger 397..417 CDD:275368 17/19 (89%)
zf-H2C2_2 409..434 CDD:290200 22/24 (92%)
C2H2 Zn finger 425..445 CDD:275368 18/19 (95%)
zf-H2C2_2 437..460 CDD:290200 21/22 (95%)
C2H2 Zn finger 453..473 CDD:275368 17/19 (89%)
zf-C2H2 479..501 CDD:278523
C2H2 Zn finger 481..501 CDD:275368
zf-H2C2_2 493..518 CDD:290200
C2H2 Zn finger 509..529 CDD:275368
osr1NP_001006079.1 zf-C2H2 174..196 CDD:278523 18/21 (86%)
C2H2 Zn finger 176..196 CDD:275368 17/19 (89%)
zf-H2C2_2 188..213 CDD:290200 22/24 (92%)
C2H2 Zn finger 204..224 CDD:275368 18/19 (95%)
zf-H2C2_2 216..239 CDD:290200 21/22 (95%)
C2H2 Zn finger 232..252 CDD:275368 17/19 (89%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I11342
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000748
OrthoInspector 1 1.000 - - mtm6437
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14196
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1664
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.970

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