Sequence 1: | NP_476882.1 | Gene: | sob / 33581 | FlyBaseID: | FBgn0004892 | Length: | 578 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262343.1 | Gene: | rn / 40879 | FlyBaseID: | FBgn0267337 | Length: | 952 | Species: | Drosophila melanogaster |
Alignment Length: | 635 | Identity: | 149/635 - (23%) |
---|---|---|---|
Similarity: | 227/635 - (35%) | Gaps: | 187/635 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 TSKHHSNNNHK--------PS------------AAATATAAHKKSESCNSNGNKCTAATSPI--- 101
Fly 102 GSKTSNAAMAAATATAAAATNDLAAAAAVVLSLQGTMVSSLQQAALLPANSAAAAALNLQALESY 166
Fly 167 LALQRLTGKSDVFRFSNSNTG---SSNSNNATTCNSSSSEADNNALP----------------SL 212
Fly 213 IDIANIELKSSCSSS--SSGEPPLTAATASAAATSSPSSNNSNSTSTPTT-SKCVPLPSIGTVSA 274
Fly 275 AVAAAAAAAAAAASQQAALDCATAAELAAECDLPL--LDGED----------ALSFE-------- 319
Fly 320 -----------AGDLD-----SSYGSFMFNPSAFSQAETDSALHSLQATMYQDKMS--------- 359
Fly 360 -------------------VISGAAGGVGAGAVGGLEEAGSS--------------------AAA 385
Fly 386 AAAQ------------------------------RSKKQFICKFCNRQFTKSYNLLIHERTHTDE 420
Fly 421 -RPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCAECGKGFCQSRTLAVHKILHMEESPHKC--P 482
Fly 483 VCNRSFNQRSNLKTHLLTHTDIKPYNCASCGKVFRRNCDLRRHSLTHNLS 532 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sob | NP_476882.1 | COG5048 | <389..529 | CDD:227381 | 50/172 (29%) |
C2H2 Zn finger | 397..417 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 409..434 | CDD:290200 | 11/25 (44%) | ||
C2H2 Zn finger | 425..445 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 437..460 | CDD:290200 | 8/22 (36%) | ||
C2H2 Zn finger | 453..473 | CDD:275368 | 6/19 (32%) | ||
zf-C2H2 | 479..501 | CDD:278523 | 10/23 (43%) | ||
C2H2 Zn finger | 481..501 | CDD:275368 | 9/21 (43%) | ||
zf-H2C2_2 | 493..518 | CDD:290200 | 11/24 (46%) | ||
C2H2 Zn finger | 509..529 | CDD:275368 | 7/19 (37%) | ||
rn | NP_001262343.1 | C2H2 Zn finger | 490..510 | CDD:275368 | 6/19 (32%) |
C2H2 Zn finger | 519..539 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 531..556 | CDD:290200 | 9/24 (38%) | ||
zf-C2H2 | 545..567 | CDD:278523 | 6/21 (29%) | ||
C2H2 Zn finger | 547..567 | CDD:275368 | 6/19 (32%) | ||
zf-C2H2_8 | 550..630 | CDD:292531 | 29/79 (37%) | ||
zf-H2C2_2 | 559..586 | CDD:290200 | 9/26 (35%) | ||
C2H2 Zn finger | 575..597 | CDD:275368 | 9/21 (43%) | ||
C2H2 Zn finger | 605..625 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 636..656 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 72 | 1.000 | Inparanoid score | I3889 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.050 |