DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sob and bowl

DIOPT Version :9

Sequence 1:NP_476882.1 Gene:sob / 33581 FlyBaseID:FBgn0004892 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001245861.1 Gene:bowl / 33602 FlyBaseID:FBgn0004893 Length:744 Species:Drosophila melanogaster


Alignment Length:463 Identity:201/463 - (43%)
Similarity:225/463 - (48%) Gaps:121/463 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 NSAAAAALNLQALESYLALQRLTGKSDVFRFSNSNTGSSNSNNATTCNSSSS--EADNNALPSLI 213
            ||.||||       :.:....|.|.:|....|..:.|.|.:.|..:.|||:|  .|....|....
  Fly    31 NSMAAAA-------AAVGGGGLPGAADRNGGSGGSDGGSQNGNGDSRNSSASRISAYETQLAYQQ 88

  Fly   214 DIANIELKSSCSSSSSGEPPLTAATASAAATSSPSSNNSNSTSTPTTSKCVPLPSIGTVSAAVAA 278
            .:|.:.          |.||          ...||.:...|...|........|...:....:|.
  Fly    89 HLAGLH----------GPPP----------PPPPSHHREISAFVPVLPTGKVRPGSNSNYEIIAM 133

  Fly   279 AAAAAAAAASQQAALDCATAAEL---------------------AAECDLPLLDGEDALSFEAGD 322
            .|......|.::||   |.||.|                     |.....|.|.|       .|.
  Fly   134 MADKRKELALREAA---AAAAMLGRGPGGPGGPGVPPPGVLYGPAGVPPPPYLTG-------PGP 188

  Fly   323 LDSSYGSFMFNPSAFSQAETDSALHSLQATMYQDKMSVISGAAGGVGAGAVGGLEEAGSSAAAAA 387
            ..:..|||.|.|.|.:            |.::..          |:|.|...||:.. ...|...
  Fly   189 SPTGAGSFPFPPGAAA------------AALFPP----------GLGPGMHAGLDRR-LLRAPGR 230

  Fly   388 AQRSKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFK 452
            |.|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   231 ASRPKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFK 295

  Fly   453 CAECGKGFCQSRTLAVHKILHMEESPHKCPVCNRSFNQRSNLKTHLLTHTDIKPYNCASCGKVFR 517
            |.||||||||||||||||||||||||||||||:||||||||||||||||||.|||.|:|||||||
  Fly   296 CTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDHKPYECSSCGKVFR 360

  Fly   518 RNCDLRRHSLTHNLSAGVGGVVGG----------------------------------NLSDPFG 548
            ||||||||:|||    .||.|..|                                  ||.:..|
  Fly   361 RNCDLRRHALTH----AVGEVNSGDYVDVGEEDEARNLSGDEEDSLLEVDSPRQSPVHNLGESGG 421

  Fly   549 SGSSSSSE 556
            ||..|.||
  Fly   422 SGEKSESE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sobNP_476882.1 COG5048 <389..529 CDD:227381 131/139 (94%)
C2H2 Zn finger 397..417 CDD:275368 19/19 (100%)
zf-H2C2_2 409..434 CDD:290200 24/24 (100%)
C2H2 Zn finger 425..445 CDD:275368 19/19 (100%)
zf-H2C2_2 437..460 CDD:290200 21/22 (95%)
C2H2 Zn finger 453..473 CDD:275368 18/19 (95%)
zf-C2H2 479..501 CDD:278523 20/21 (95%)
C2H2 Zn finger 481..501 CDD:275368 18/19 (95%)
zf-H2C2_2 493..518 CDD:290200 21/24 (88%)
C2H2 Zn finger 509..529 CDD:275368 17/19 (89%)
bowlNP_001245861.1 COG5048 <232..372 CDD:227381 131/139 (94%)
C2H2 Zn finger 240..260 CDD:275368 19/19 (100%)
zf-H2C2_2 252..277 CDD:290200 24/24 (100%)
C2H2 Zn finger 268..288 CDD:275368 19/19 (100%)
zf-H2C2_2 280..303 CDD:290200 21/22 (95%)
C2H2 Zn finger 296..316 CDD:275368 18/19 (95%)
zf-C2H2 322..344 CDD:278523 20/21 (95%)
C2H2 Zn finger 324..344 CDD:275368 18/19 (95%)
zf-H2C2_2 336..361 CDD:290200 21/24 (88%)
C2H2 Zn finger 352..372 CDD:275368 17/19 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462397
Domainoid 1 1.000 53 1.000 Domainoid score I11342
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5238
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D18266at7147
OrthoFinder 1 1.000 - - FOG0000748
OrthoInspector 1 1.000 - - mtm6437
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR14196
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.900

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