back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment sob and Osr1

DIOPT Version :9

Sequence 1:	NP_476882.1	Gene:	sob / 33581	FlyBaseID:	FBgn0004892	Length:	578	Species:	Drosophila melanogaster
Sequence 2:	NP_001100186.1	Gene:	Osr1 / 298878	RGDID:	1311807	Length:	266	Species:	Rattus norvegicus

Alignment Length:	150	Identity:	90/150 - (60%)
Similarity:	102/150 - (68%)	Gaps:	12/150 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly   343 DSALHSLQATMYQDKMSVISGAAGGVGAGAVGGLEEAGSSAAAAAAQR------SKKQFICKFCN 401
            |.|..:|.||. :|...:..|...|..||.:|.|.:....:......|      :||:|:||||.
  Rat   118 DFANLALAATQ-EDPTKLGRGEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFCG 181

  Fly   402 RQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCAECGKGFCQSRTL 466
            |.||||||||||||||||||||:||||.||||||||||||||||||||||||.||||||||||||
  Rat   182 RHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTL 246

  Fly   467 AVHKILH-----MEESPHKC 481
            ||||.||     ::.|..||
  Rat   247 AVHKTLHSQVKELKTSKIKC 266

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.